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msnp
2008 Feb 25
0
Memory problem with 64bit R using PLASQ500k
..."STD",normStyFolder="SND",betasSty=NULL,quantSty=NULL,betasSty
File="betasSty.Rdata",rawCNStyfile="rawCNSty.Rdata")
Using only six 250K Sty CEL-files it was impossible to finish this
calculation.
On a 32GB RAM Linux server the job got killed, since function EMSNP() which
is called from function getBetas() used up all RAM. Starting the computation
on our 64GB RAM Linux server, function EMSNP() could be executed,
nevertheless, we had to kill the job, when it reached memory consumption of
74GB!!! at a later stage!
Interestingly, when running PLASQ500K on my l...