Displaying 2 results from an estimated 2 matches for "effectivesize".
2005 Sep 27
1
About Coda Package
...n in CRAN) to analyse the output from a MCMC Bayesian analysis. And I get unconsitented results. I have export the chain using the read.table function and after I have transformed this data frame to an mcmc object using the mcmc function. I am interested in three variables, when I use the function effectiveSize I have these figures: 403.3730 1854.4534 369.8643. But when I run the function codamenu to perform same convergence test I get this warning mensage:
Checking effective sample size ...
*******************************************
WARNING !!!
Some variables in yo...
2011 Aug 23
1
pMCMC and HPD in MCMCglmm
Dear R users,
I?d like to pose aquestion about pMCMC and HDP.
I have performed a mixed logistic regression by MCMCglmm (a very good package)
obtaining the following results:
Iterations = 250001:799901
Thinning interval = 100
Sample size = 5500
DIC: 10.17416
G-structure: ~ID_an
post.mean l-95% CI u-95% CIeff.samp
ID_an 0.7023 0.0001367 3.678 2126
R-structure: ~units
post.mean l-95%