search for: dushoff

...----------------------------------------------------- > ./configure (lots of positive stuff) checking for X... no configure: error: --with-x=yes (default) and X11 headers/libs are not available ---------- Forwarded message ---------- Date: Mon, 12 Jun 2006 21:27:02 -0400 (EDT) From: Jonathan Dushoff <dushoff at eno.princeton.edu> To: R-help at stat.math.ethz.ch Subject: Where is package gridBase? Trying to follow the instructions on the page http://tolstoy.newcastle.edu.au/R/help/05/12/17153.html (to make a figure with an inset), I typed > install.packages("gridBase", repo...

I have two matrices, generated by R functions that I don't understand. I want to confirm that they're the same, but I know that they have different attributes. If I want to compare the dimnames, I can say > identical(attr(tm, "dimnames"), attr(tmm, "dimnames")) [1] FALSE or even: > identical(dimnames(tm), dimnames(tmm)) [1] FALSE But I can't find any

Under Details, the documentation says "[if Rowv or Colv] is 'NULL', _no reordering_ will be done for the corresponding side." In fact, as explained elsewhere in the documentation, 'NA' is required, not 'NULL'. An anonymous expert suggested that I should attach an svn diff file to this report, so I will. JD -------------- next part -------------- Index:

The hybrid feature in fisher.test looks to me like an excellent way to analyze my two-way tables. The only problem is that it does not seem to be implemented. Am I right about this? An example is pasted below. I note that I get the warning message only when I shouldn't: for a 2x2 table hybrid seems to be ignored without warning. In no case does fisher.test seem to be checking Cochran

...controlling the line width of Sweave source, using R, Sweave or LaTeX options. Making the font smaller does not count, though; I want to break the lines. Any help is appreciated. An example of Sweave input and output is appended. The last break is right, while the others are too late. Jonathan Dushoff ---------------------------------------------------------------------- bug.rnw <<>>= options(width=55) data(state) data.frame(area=mean(state.area), pop=mean(state.pop), hop=mean(state.area)) c(medianarea=median(state.area), medianpop=median(state.pop)) c(medianarea=median(media...

...9;t seem to feed components of my aovlist to TukeyHSD. I guess I wouldn't expect to be able to use the error strata, but I did expect to be able to use the final stratum. I have posted a complete example, which I hope explains why I am confused, below. Any help will be appreciated. Jonathan Dushoff ---------------------------------------------------------------------- > morley$Expt = factor(morley$Expt) > morley$Run = factor(morley$Run) > > mod = aov(Speed~Expt+Run, data=morley) > class(mod) [1] "aov" "lm" > > TukeyHSD(mod)$Expt diff l...

I have a list of observations of individuals. I would like to make a list of individuals, with a data frame of observations for each individual. The following code usually works, but not always ---------------------------------------------------------------------- # Make a list of empty data frames animals = list() indivs = levels(Z$individual_id) donotprint <- sapply(indivs, function(i){