Displaying 20 results from an estimated 28 matches for "dpodi".
2017 Feb 09
3
Ancient C /Fortran code linpack error
In my package 'glmmML' I'm using old C code and linpack in the
optimizing procedure. Specifically, one part of the code looks like this:
F77_CALL(dpoco)(*hessian, &bdim, &bdim, &rcond, work, info);
if (*info == 0){
F77_CALL(dpodi)(*hessian, &bdim, &bdim, det, &job);
........
This usually works OK, but with an ill-conditioned data set (from a user
of glmmML) it happened that the hessian was all nan. However, dpoco
returned *info = 0 (no error!) and then the call to dpodi hanged R!
I googled for C and...
2017 Feb 09
3
Ancient C /Fortran code linpack error
...my package 'glmmML' I'm using old C code and linpack in the optimizing procedure. Specifically, one part of the code looks like this:
> >
> > F77_CALL(dpoco)(*hessian, &bdim, &bdim, &rcond, work, info);
> > if (*info == 0){
> > F77_CALL(dpodi)(*hessian, &bdim, &bdim, det, &job);
> > ........
> >
> > This usually works OK, but with an ill-conditioned data set (from a user of glmmML) it happened that the hessian was all nan. However, dpoco returned *info = 0 (no error!) and then the call to dpodi hang...
2017 Feb 10
1
Ancient C /Fortran code linpack error
...39; I'm using old C code and linpack in the optimizing procedure. Specifically, one part of the code looks like this:
>>>>
>>>> F77_CALL(dpoco)(*hessian, &bdim, &bdim, &rcond, work, info);
>>>> if (*info == 0){
>>>> F77_CALL(dpodi)(*hessian, &bdim, &bdim, det, &job);
>>>> ........
>>>>
>>>> This usually works OK, but with an ill-conditioned data set (from a user of glmmML) it happened that the hessian was all nan. However, dpoco returned *info = 0 (no error!) and then th...
2000 Apr 24
1
compiling R-1.0.1 under Solaris
...a Rsock.o S_compat.o approx.o bakslv.o binning.o chisqsim.o
chull.o c
poly.o cumsum.o distance.o fft.o fmin.o fortran.o lbfgsb.o loglin.o
lowess.o mac
har.o massdist.o pretty.o pythag.o rowsum.o sock.o splines.o stem.o
strsignif.o
tabulate.o uncmin.o zeroin.o ch2inv.o chol.o dpbfa.o dpbsl.o dpoco.o
dpodi.o dpo
fa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o
dtrsl.o e
igen.o lminfl.o blas.o
make[3]: cr: Command not found
make[3]: *** [libappl.a] Error 127
make[3]: Leaving directory `/home/ppp/paradis/R/R-1.0.1/src/appl'
make[2]: *** [R] Error 2
make[2]: Leaving directory `...
2017 Feb 09
0
Ancient C /Fortran code linpack error
...wrote:
>
> In my package 'glmmML' I'm using old C code and linpack in the optimizing procedure. Specifically, one part of the code looks like this:
>
> F77_CALL(dpoco)(*hessian, &bdim, &bdim, &rcond, work, info);
> if (*info == 0){
> F77_CALL(dpodi)(*hessian, &bdim, &bdim, det, &job);
> ........
>
> This usually works OK, but with an ill-conditioned data set (from a user of glmmML) it happened that the hessian was all nan. However, dpoco returned *info = 0 (no error!) and then the call to dpodi hanged R!
>
>...
2017 Feb 10
0
Ancient C /Fortran code linpack error
...'glmmML' I'm using old C code and linpack in the optimizing procedure. Specifically, one part of the code looks like this:
>>>
>>> F77_CALL(dpoco)(*hessian, &bdim, &bdim, &rcond, work, info);
>>> if (*info == 0){
>>> F77_CALL(dpodi)(*hessian, &bdim, &bdim, det, &job);
>>> ........
>>>
>>> This usually works OK, but with an ill-conditioned data set (from a user of glmmML) it happened that the hessian was all nan. However, dpoco returned *info = 0 (no error!) and then the call to dp...
2001 Jan 25
1
problems compiling R under digital unix 4.0d (PR#826)
...Rsock.o approx.o bakslv.o binning.o chisqsim.o chull.o
cpoly.o cumsum.o distance.o fft.o fmin.o fortran.o lbfgsb.o loglin.o
lowess.o machar.o maxcol.o massdist.o pretty.o rowsum.o sock.o
splines.o stem.o strsignif.o tabulate.o uncmin.o zeroin.o ch2inv.o
chol.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o
dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o eigen.o lminfl.o
ranlib libappl.a
#make: No such file or directory
*** Exit 1
Stop.
*** Exit 1
Stop.
*** Exit 1
Stop.
fenchel:/net/prod/appl/R/R-1.2.1/>
The same problem appears when I try to compile v.1.2.0...
2005 Mar 29
1
final stages of installing R - please help?
...bappl.a approx.o bakslv.o bandwidths.o binning.o chull.o
cpoly.o cumsum.o fft.o fmin.o integrate.o interv.o lbfgsb.o loglin.o
lowess.o machar.o maxcol.o massdist.o pretty.o rcont.o rowsum.o
splines.o stem.o strsignif.o tabulate.o uncmin.o zeroin.o ch2inv.o
chol.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o
dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o eigen.o
lminfl.o blas.o zgemm.o
make[3]: *** [libappl.a] Error 1
make[3]: Leaving directory `/home/gruen/Applications/R-2.0.1/src/appl'
make[2]: *** [R] Error 2
make[2]: Leaving directory `/home/gruen/Applica...
1998 Sep 11
1
R-beta: cannot make R
...dswap:
idamax:
f77 -c ch2inv.f -o ch2inv.o
ch2inv.f:
ch2inv:
f77 -c chol.f -o chol.o
chol.f:
chol:
gcc -g -O2 -I../include -c cpoly.c
gcc -g -O2 -I../include -c cumsum.c
gcc -g -O2 -I../include -c distance.c
f77 -c dpoco.f -o dpoco.o
dpoco.f:
dpoco:
f77 -c dpodi.f -o dpodi.o
dpodi.f:
dpodi:
f77 -c dpofa.f -o dpofa.o
dpofa.f:
dpofa:
f77 -c dposl.f -o dposl.o
dposl.f:
dposl:
f77 -c dqrdc.f -o dqrdc.o
dqrdc.f:
dqrdc:
f77 -c dqrdc2.f -o dqrdc2.o
dqrdc2.f:
dqrdc2:
f77 -c dqrls.f -o dqrls.o
dqrls.f:
dqrls:
f77...
2006 Apr 28
0
random NaN in dpotri result
...cannot. Even with the same input matrix,
sometimes I get a NaN but most of the time I do not, and their occurrence
seems to be random and random in the matrix. When dpotri, does not produce
the NaN, the solution is correct.
To assure myself that I was not totally nuts, I tried both Linpack's dpodi
and a chol2inv routine from Numerical Recipes in place of dpotri. Both of
these routines never produce the nan and provide the correct result.
I hesitate to post this problem, as I cannot get it to reproduce on a
regular basis. Valgrind didn't report any memory access problems on my
code.
H...
1998 Nov 06
1
DEC alpha INSTALLATION R-0.62.4
...binning.c
f77 -c blas.f -o blas.o
f77 -c ch2inv.f -o ch2inv.o
f77 -c chol.f -o chol.o
cc -ieee_with_inexact -g -I../../src/include -c cpoly.c
cc -ieee_with_inexact -g -I../../src/include -c cumsum.c
cc -ieee_with_inexact -g -I../../src/include -c distance.c
f77 -c dpoco.f -o dpoco.o
f77 -c dpodi.f -o dpodi.o
f77 -c dpofa.f -o dpofa.o
f77 -c dposl.f -o dposl.o
f77 -c dqrdc.f -o dqrdc.o
f77 -c dqrdc2.f -o dqrdc2.o
f77 -c dqrls.f -o dqrls.o
f77 -c dqrsl.f -o dql.o
f77 -c dqrutl.f -o dqrutl.o
f77 -c dsvdc.f -o dsvdc.o
f77 -c dtrsl.f -o dtrsl.o
cc -ieee_with_inexact -g -I../../src/incl...
1997 Dec 13
1
R-beta: Compile error; R-0.60.1, Solaris 2.6, gcc 2.7.2.1
....o
gcc -g -I../include -c ch2inv.c -o ch2inv.o
gcc -g -I../include -c chol.c -o chol.o
gcc -g -I../include -c cpoly.c -o cpoly.o
gcc -g -I../include -c cumsum.c -o cumsum.o
gcc -g -I../include -c distance.c -o distance.o
gcc -g -I../include -c dpoco.c -o dpoco.o
gcc -g -I../include -c dpodi.c -o dpodi.o
gcc -g -I../include -c dpofa.c -o dpofa.o
gcc -g -I../include -c dposl.c -o dposl.o
gcc -g -I../include -c dqrdc.c -o dqrdc.o
gcc -g -I../include -c dqrdc2.c -o dqrdc2.o
gcc -g -I../include -c dqrls.c -o dqrls.o
gcc -g -I../include -c dqrsl.c -o dqrsl.o
gcc -g -I../include...
1998 Dec 08
0
R compile problems with AIX
...o
f77 -c ch2inv.f -o ch2inv.o
f77 -c chol.f -o chol.o
gcc -g -O2 -I../include -I../../src/include -c cpoly.c -o cpoly.o
gcc -g -O2 -I../include -I../../src/include -c cumsum.c -o cumsum.o
gcc -g -O2 -I../include -I../../src/include -c distance.c -o distance.o
f77 -c dpoco.f -o dpoco.o
f77 -c dpodi.f -o dpodi.o
f77 -c dpofa.f -o dpofa.o
f77 -c dposl.f -o dposl.o
f77 -c dqrdc.f -o dqrdc.o
f77 -c dqrdc2.f -o dqrdc2.o
f77 -c dqrls.f -o dqrls.o
f77 -c dqrsl.f -o dqrsl.o
f77 -c dqrutl.f -o dqrutl.o
f77 -c dsvdc.f -o dsvdc.o
f77 -c dtrco.f -o dtrco.o
f77 -c dtrsl.f -o dtrsl.o
gcc -g -O2 -...
1998 Dec 08
0
R compile problems with AIX
...o
f77 -c ch2inv.f -o ch2inv.o
f77 -c chol.f -o chol.o
gcc -g -O2 -I../include -I../../src/include -c cpoly.c -o cpoly.o
gcc -g -O2 -I../include -I../../src/include -c cumsum.c -o cumsum.o
gcc -g -O2 -I../include -I../../src/include -c distance.c -o distance.o
f77 -c dpoco.f -o dpoco.o
f77 -c dpodi.f -o dpodi.o
f77 -c dpofa.f -o dpofa.o
f77 -c dposl.f -o dposl.o
f77 -c dqrdc.f -o dqrdc.o
f77 -c dqrdc2.f -o dqrdc2.o
f77 -c dqrls.f -o dqrls.o
f77 -c dqrsl.f -o dqrsl.o
f77 -c dqrutl.f -o dqrutl.o
f77 -c dsvdc.f -o dsvdc.o
f77 -c dtrco.f -o dtrco.o
f77 -c dtrsl.f -o dtrsl.o
gcc -g -O2 -...
1999 Jun 09
4
packages with FORTRAN code
Recent sensible changes to the dynload mechanism have made an old
problem resurface: how should we deal with packages which contain
Fortran code and may need to be linked against additional libraries
such as -lf2c?
The current consensus is that extra Fortran libraries maybe needed are
handled via the make variable FLIBS, and that `-lf2c' or `-lg2c' are
added by default if g77 is used.
2002 Jan 22
1
compile problem with bessel_i.c on IRIX64 flexor 6.5 10100655 IP35 (uname -a) (PR#1275)
...n.o
gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -c zeroin.c -o zeroin.o
g77 -g -O2 -c ch2inv.f -o ch2inv.o
g77 -g -O2 -c chol.f -o chol.o
g77 -g -O2 -c dpbfa.f -o dpbfa.o
g77 -g -O2 -c dpbsl.f -o dpbsl.o
g77 -g -O2 -c dpoco.f -o dpoco.o
g77 -g -O2 -c dpodi.f -o dpodi.o
g77 -g -O2 -c dpofa.f -o dpofa.o
g77 -g -O2 -c dposl.f -o dposl.o
g77 -g -O2 -c dqrdc.f -o dqrdc.o
g77 -g -O2 -c dqrdc2.f -o dqrdc2.o
g77 -g -O2 -c dqrls.f -o dqrls.o
g77 -g -O2 -c dqrsl.f -o dqrsl.o
g77 -g -O2 -c dqrutl.f -o dqrutl.o
g77 -g -O2 -c dsvdc.f -o ds...
2000 Oct 31
1
conflicting types for `Rf_stirlerr
...I../../src/include -I../../src/include -I/usr/local/include
-DHAVE_CONFIG_H -g -O2 -c zeroin.c -o zeroin.o
g77 -g -O2 -c ch2inv.f -o ch2inv.o
g77 -g -O2 -c chol.f -o chol.o
g77 -g -O2 -c dpbfa.f -o dpbfa.o
g77 -g -O2 -c dpbsl.f -o dpbsl.o
g77 -g -O2 -c dpoco.f -o dpoco.o
g77 -g -O2 -c dpodi.f -o dpodi.o
g77 -g -O2 -c dpofa.f -o dpofa.o
g77 -g -O2 -c dposl.f -o dposl.o
g77 -g -O2 -c dqrdc.f -o dqrdc.o
g77 -g -O2 -c dqrdc2.f -o dqrdc2.o
g77 -g -O2 -c dqrls.f -o dqrls.o
g77 -g -O2 -c dqrsl.f -o dqrsl.o
g77 -g -O2 -c dqrutl.f -o dqrutl.o
g77 -g -O2 -c dsvdc.f -o dsvdc.o
g7...
2018 May 24
1
Trouble building R 3.5.0 under Ubuntu 18.04 (Bionic Beaver)
...elocation R_X86_64_32
against `.rodata' can not be used when making a PIE object; recompile
with -fPIC
/usr/bin/x86_64-linux-gnu-ld: ../appl/dpoco.o: relocation R_X86_64_32
against `.rodata' can not be used when making a PIE object; recompile
with -fPIC
/usr/bin/x86_64-linux-gnu-ld: ../appl/dpodi.o: relocation R_X86_64_32
against `.rodata' can not be used when making a PIE object; recompile
with -fPIC
/usr/bin/x86_64-linux-gnu-ld: ../appl/dpofa.o: relocation R_X86_64_32
against `.rodata' can not be used when making a PIE object; recompile
with -fPIC
/usr/bin/x86_64-linux-gnu-ld: ../...
1999 May 03
1
problems compiling R-0.63.3 on alpha
...e_with_inexact -g -I../include -I../../src/include -c cpoly.c -o
cpoly.o
gcc -ieee_with_inexact -g -I../include -I../../src/include -c cumsum.c -o
cumsum.o
gcc -ieee_with_inexact -g -I../include -I../../src/include -c distance.c -o
distance.o
f77 -g -fpe3 -c dpoco.f -o dpoco.o
f77 -g -fpe3 -c dpodi.f -o dpodi.o
f77 -g -fpe3 -c dpofa.f -o dpofa.o
f77 -g -fpe3 -c dposl.f -o dposl.o
f77 -g -fpe3 -c dqrdc.f -o dqrdc.o
f77 -g -fpe3 -c dqrdc2.f -o dqrdc2.o
f77 -g -fpe3 -c dqrls.f -o dqrls.o
f77 -g -fpe3 -c dqrsl.f -o dqrsl.o
f77 -g -fpe3 -c dqrutl.f -o dqrutl.o
f77 -g -fpe3 -c dsvdc.f -o dsvdc.o
f7...
1999 May 03
0
compilation of R-0.63.3 on alpha (PR#183)
...ct -g -I../include -I../../src/include -c cpoly.c -o=
=
cpoly.o
gcc -ieee_with_inexact -g -I../include -I../../src/include -c cumsum.c -=
o =
cumsum.o
gcc -ieee_with_inexact -g -I../include -I../../src/include -c distance.c=
-o =
distance.o
f77 -g -fpe3 -c dpoco.f -o dpoco.o
f77 -g -fpe3 -c dpodi.f -o dpodi.o
f77 -g -fpe3 -c dpofa.f -o dpofa.o
f77 -g -fpe3 -c dposl.f -o dposl.o
f77 -g -fpe3 -c dqrdc.f -o dqrdc.o
f77 -g -fpe3 -c dqrdc2.f -o dqrdc2.o
f77 -g -fpe3 -c dqrls.f -o dqrls.o
f77 -g -fpe3 -c dqrsl.f -o dqrsl.o
f77 -g -fpe3 -c dqrutl.f -o dqrutl.o
f77 -g -fpe3 -c dsvdc.f -o dsvdc.o
f7...