search for: dpackage_version

Displaying 20 results from an estimated 64 matches for "dpackage_version".

Did you mean: package_version
2008 Dec 01
2
[BioC] BioC 2.3 standard installation
I always followed http://cran.r-project.org/bin/linux/ubuntu/ to install R on Ubuntu 8.1. I had no errors before! > install.packages("XML") Warning in install.packages("XML") : argument 'lib' is missing: using '/usr/local/lib/R/site-library' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL
2008 Jun 26
1
Compilation error during package installation
...for xml2-config... none checking for __gmpz_add in -lgmp... no configure: creating ./config.status config.status: creating src/config.h config.status: creating R/config.R config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/lib/R/include -I/usr/local/include -DUSING_R -I. -g -O2 -DPACKAGE_VERSION=\"0.5\" -DINTERNAL_ARPACK -DINTERNAL_LAPACK -DINTERNAL_BLAS -fpic -g -O2 -c adjlist.c -o adjlist.o igraph.h:435: warning: inline function ?igraph_es_type? declared but never defined igraph.h:233: warning: inline function ?igraph_vs_type? declared but never defined igraph.h:435: warning:...
2007 Jul 23
1
Rmpi installation error
...bably not LAM-MPI checking for openpty in -lutil... no checking for main in -lpthread... no configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -I/usr/local/lib64/R/include -I/usr/local/lib64/R/include -DPACKAGE_NAME =\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -D PACKAGE_BUGREPORT=\"\" -I/usr/local/mpich-1.2.7p1/include -DMPI2 -I/usr/loc al/include -fpic -g -O2 -std=gnu99 -c conversion.c -o conversion.o gcc -I/usr/local/lib64/R/include -I/usr/local/lib64/R/include -DPACKAGE_NAME =\"\"...
2011 Sep 09
1
R CMD INSTALL configure.args and CC customization
...ibmpi in /usr/lib64/openmpi/1.2.7-gcc/lib checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib64/openmpi/1.2.7-gcc/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c RegQuer...
2011 Mar 07
1
Rmpi fails to install
...d libmpi in /usr/lib checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -march=nocona -O2 -pipe -fomit-frame-pointer -c RegQuery.c -o RegQuery.o x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include -DPACKAGE_NAME=\"...
2010 Jan 20
0
R CMD INSTALL configure.args and CC customization
...ibmpi in /usr/lib64/openmpi/1.2.7-gcc/lib checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib64/openmpi/1.2.7-gcc/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c RegQuer...
2008 Jan 16
3
Rmpi on Linux x86_64 GNU/Linux
...-lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/import/home/u1/uaf/ogorman/lam/include -DMPI2 -DLAM -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o gcc -std=gnu99 -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -I/usr/local/pkg/r/r-2.6...
2009 Feb 06
2
Rmpi Segmentation fault
...h.a Found libmpi in /usr/local/lib checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/local/include -DMPI2 -DOPENMPI -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o gcc -std=gnu99 -I/usr/local/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\&qu...
2012 Oct 10
1
Rmpi installation trouble
...Found libmpi in /usr/local/lib checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/local/include -DMPI2 -DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\...
2011 May 27
1
Help with Rmpi install
...g *source* package ?Rmpi? ... checking for openpty in -lutil... no checking for main in -lpthread... no configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/usc/R/2.13.0/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/usc/mpich/default/default/include -DMPICH -I/usr/local/include -fpic -g -O2 -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/usc/R/2.13.0/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\...
2012 Aug 29
2
Problem installing Rmpi with Open MPI
...Found libmpi in /usr/local//lib checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/local//include -DMPI2 -DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME...
2009 Jul 24
2
ffmpeg2theora: Undefined symbols?
...not find libkate. Subtitles support will be disabled. You can also run ./get_libkate.sh (for more information see INSTALL) or update PKG_CONFIG_PATH to point to libkate's source folder scons: done reading SConscript files. scons: Building targets ... gcc -o src/avinfo.o -c -DPACKAGE_VERSION=\"0.24\" -DPACKAGE_STRING= \"ffmpeg2theora-0.24\" -DPACKAGE=\"ffmpeg2theora\" - D_FILE_OFFSET_BITS=64 -DHAVE_FRAMEHOOK -I. -I/usr/local/include - Iffmpeg src/avinfo.c gcc -o src/ffmpeg2theora.o -c -DPACKAGE_VERSION=\"0.24\" - DPACKAGE_STRING=\"ffmpeg...
2006 Oct 09
2
Installing Rmpi on 64-bit Linux Athlon
...openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -I/gcm/home/a347549/local64/lib64/R/include -I/gcm/home/a347549/local64/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/gcm/home/a347549/local64/include -DMPI2 -I/usr/local/include -fpic -g -O2 -std=gnu99 -c RegQuery.c -o RegQuery.o gcc -I/gcm/home/a347549/local64/lib64/R/include -I/gcm/home/a347549/local64/lib64/R/include -DPA...
2011 Mar 14
1
Installing Rmpi on hpc
...d liblam in /usr/lib/lam/lib checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/home/bs/R_home/R-2.11.1/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib/lam/include -DMPI2 -DLAM -I/usr/local/include -fpic -g -O2 -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/home/bs/R_home/R-2.11.1/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -...
2007 Apr 24
1
Problem installing Rmpi with lam on SGI SLES9
.../usr/local/lam-mpi/lib checking for openpty in -lutil... no checking for main in -lpthread... no configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -I/usr/local/lib/R/include -I/usr/local/lib/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/local/lam-mpi/include -DMPI2 -I/usr/local/include -fpic -g -O2 -std=gnu99 -c RegQuery.c -o RegQuery.o gcc -I/usr/local/lib/R/include -I/usr/local/lib/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAM...
2004 Sep 10
4
Updating flac include problems
....0.4, it won't compile because finds the headers of the previous version in /sw/include, because the CPPFLAGS/CFLAGS are being put before the local includes: (configure with ./configure --prefix=/sw --mandir=/sw/share/man ) gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"flac\" -DVERSION=\"1.0.4\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -D...
2007 Oct 08
0
shared object for Rmpi
...e/faculty/hodgess/lib checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/home/faculty/hodgess/R-2.6.0/include -I/home/faculty/hodgess/R-2.6.0/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/home/faculty/hodgess/include -DMPI2 -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o gcc -std=gnu99 -I/home/faculty/hodgess/R-2.6.0/include -I/home/faculty/hodgess/R-2.6.0/include -DPACKA...
2004 Aug 06
1
Re: speex 1.1.4 compile fails/vq.h parse error
...install" to compile and install Speex > ESTIMATED COMPILE TIME: 0:19.70. > Making all in libspeex > make[1]: Entering directory `/home/war/speex-1.1.4/libspeex' > if /bin/sh ../libtool --mode=compile gcc -DPACKAGE_NAME=\"\" > -DPACKAGE_TARNAME=\ > "\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" > -DSTDC > _HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STR > ING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 > -DHAVE_STDINT_H > =1 -DHAVE_UNISTD_H...
2004 Sep 10
3
Compiling problem flac 1.0.4 Mandrake 9.0 gcc 3.2
...9;file_decoder.cc' object='file_decoder.lo' libtool=yes \ depfile='.deps/file_decoder.Plo' tmpdepfile='.deps/file_decoder.TPlo' \ depmode=none /bin/sh ../../depcomp \ /bin/sh ../../libtool --mode=compile g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT =\"\" -DPACKAGE=\"flac\" -DVERSION=\"1.0.4\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE...
2007 Aug 27
2
Rmpi and x86
Dear R Gurus: Is there a problem with Rmpi on x86 with SUSE 10.1, please? I've tried everything and it still won't load. Has anyone else dealt with this please? Thanks, Edna Bell