search for: dpackage_bugreport

Displaying 20 results from an estimated 53 matches for "dpackage_bugreport".

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[BioC] BioC 2.3 standard installation
2008 Dec 01
2
[BioC] BioC 2.3 standard installation
I always followed http://cran.r-project.org/bin/linux/ubuntu/ to install R on Ubuntu 8.1. I had no errors before! > install.packages("XML") Warning in install.packages("XML") : argument 'lib' is missing: using '/usr/local/lib/R/site-library' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL
R CMD INSTALL configure.args and CC customization
2011 Sep 09
1
R CMD INSTALL configure.args and CC customization
...-lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib64/openmpi/1.2.7-gcc/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c RegQuery.c -o RegQuery.o gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NA...
Rmpi fails to install
2011 Mar 07
1
Rmpi fails to install
...ng for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -march=nocona -O2 -pipe -fomit-frame-pointer -c RegQuery.c -o RegQuery.o x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\...
R CMD INSTALL configure.args and CC customization
2010 Jan 20
0
R CMD INSTALL configure.args and CC customization
...-lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib64/openmpi/1.2.7-gcc/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c RegQuery.c -o RegQuery.o gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NA...
Rmpi on Linux x86_64 GNU/Linux
2008 Jan 16
3
Rmpi on Linux x86_64 GNU/Linux
...ating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/import/home/u1/uaf/ogorman/lam/include -DMPI2 -DLAM -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o gcc -std=gnu99 -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=...
Rmpi Segmentation fault
2009 Feb 06
2
Rmpi Segmentation fault
...... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/local/include -DMPI2 -DOPENMPI -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o gcc -std=gnu99 -I/usr/local/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\&quot...
Rmpi installation trouble
2012 Oct 10
1
Rmpi installation trouble
...yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/local/include -DMPI2 -DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\&q...
Help with Rmpi install
2011 May 27
1
Help with Rmpi install
...o checking for main in -lpthread... no configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/usc/R/2.13.0/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/usc/mpich/default/default/include -DMPICH -I/usr/local/include -fpic -g -O2 -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/usc/R/2.13.0/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\&q...
Problem installing Rmpi with Open MPI
2012 Aug 29
2
Problem installing Rmpi with Open MPI
...yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/local//include -DMPI2 -DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\...
Installing Rmpi on 64-bit Linux Athlon
2006 Oct 09
2
Installing Rmpi on 64-bit Linux Athlon
...nfigure: creating ./config.status config.status: creating src/Makevars ** libs gcc -I/gcm/home/a347549/local64/lib64/R/include -I/gcm/home/a347549/local64/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/gcm/home/a347549/local64/include -DMPI2 -I/usr/local/include -fpic -g -O2 -std=gnu99 -c RegQuery.c -o RegQuery.o gcc -I/gcm/home/a347549/local64/lib64/R/include -I/gcm/home/a347549/local64/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAG...
Installing Rmpi on hpc
2011 Mar 14
1
Installing Rmpi on hpc
...s checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/home/bs/R_home/R-2.11.1/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib/lam/include -DMPI2 -DLAM -I/usr/local/include -fpic -g -O2 -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/home/bs/R_home/R-2.11.1/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DP...
Problem installing Rmpi with lam on SGI SLES9
2007 Apr 24
1
Problem installing Rmpi with lam on SGI SLES9
...ing for main in -lpthread... no configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -I/usr/local/lib/R/include -I/usr/local/lib/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/local/lam-mpi/include -DMPI2 -I/usr/local/include -fpic -g -O2 -std=gnu99 -c RegQuery.c -o RegQuery.o gcc -I/usr/local/lib/R/include -I/usr/local/lib/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=...
Updating flac include problems
2004 Sep 10
4
Updating flac include problems
...ous version in /sw/include, because the CPPFLAGS/CFLAGS are being put before the local includes: (configure with ./configure --prefix=/sw --mandir=/sw/share/man ) gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"flac\" -DVERSION=\"1.0.4\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DFLAC__CPU_PPC=1...
shared object for Rmpi
2007 Oct 08
0
shared object for Rmpi
...gure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/home/faculty/hodgess/R-2.6.0/include -I/home/faculty/hodgess/R-2.6.0/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/home/faculty/hodgess/include -DMPI2 -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o gcc -std=gnu99 -I/home/faculty/hodgess/R-2.6.0/include -I/home/faculty/hodgess/R-2.6.0/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_V...
Re: speex 1.1.4 compile fails/vq.h parse error
2004 Aug 06
1
Re: speex 1.1.4 compile fails/vq.h parse error
...TIME: 0:19.70. > Making all in libspeex > make[1]: Entering directory `/home/war/speex-1.1.4/libspeex' > if /bin/sh ../libtool --mode=compile gcc -DPACKAGE_NAME=\"\" > -DPACKAGE_TARNAME=\ > "\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" > -DSTDC > _HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STR > ING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 > -DHAVE_STDINT_H > =1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DHAVE_SYS_SOUNDCARD_H=1 > -DHAVE_LIBOGG=1 -...
Compiling problem flac 1.0.4 Mandrake 9.0 gcc 3.2
2004 Sep 10
3
Compiling problem flac 1.0.4 Mandrake 9.0 gcc 3.2
...es \ depfile='.deps/file_decoder.Plo' tmpdepfile='.deps/file_decoder.TPlo' \ depmode=none /bin/sh ../../depcomp \ /bin/sh ../../libtool --mode=compile g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT =\"\" -DPACKAGE=\"flac\" -DVERSION=\"1.0.4\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DHAVE_GETOPT_LONG=1...
Rmpi and x86
2007 Aug 27
2
Rmpi and x86
Dear R Gurus: Is there a problem with Rmpi on x86 with SUSE 10.1, please? I've tried everything and it still won't load. Has anyone else dealt with this please? Thanks, Edna Bell
Rmpi installation over MPICH
2005 Jun 17
0
Rmpi installation over MPICH
...ng for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/zzz.R ** libs gcc -I/usr/lib/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -I/usr/local/include -fPIC -O2 -g -pipe -march=i386 -mcpu=i686 -c conversion.c -o conv...
Updating flac include problems
2004 Sep 10
0
Updating flac include problems
...the > CPPFLAGS/CFLAGS are being put before the local includes: > > (configure with ./configure --prefix=/sw --mandir=/sw/share/man ) > > gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" > > -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"flac\" > -DVERSION=\"1.0.4\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 > -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 > -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H...
Compiling problem flac 1.0.4 Mandrake 9.0 gcc 3.2
2004 Sep 10
0
Compiling problem flac 1.0.4 Mandrake 9.0 gcc 3.2
...ile_decoder.Plo' tmpdepfile='.deps/file_decoder.TPlo' > \ > depmode=none /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile g++ -DPACKAGE_NAME=\"\" > -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" > -DPACKAGE_BUGREPORT > =\"\" -DPACKAGE=\"flac\" -DVERSION=\"1.0.4\" -DSTDC_HEADERS=1 > -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STRING_H=1 > -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 > -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN...