search for: dopenmpi

Displaying 9 results from an estimated 9 matches for "dopenmpi".

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R CMD INSTALL configure.args and CC customization
2011 Sep 09
1
R CMD INSTALL configure.args and CC customization
....status config.status: creating src/Makevars ** libs gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib64/openmpi/1.2.7-gcc/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c RegQuery.c -o RegQuery.o gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\&...
Rmpi fails to install
2011 Mar 07
1
Rmpi fails to install
...ig.status config.status: creating src/Makevars ** libs x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -march=nocona -O2 -pipe -fomit-frame-pointer -c RegQuery.c -o RegQuery.o x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE...
R CMD INSTALL configure.args and CC customization
2010 Jan 20
0
R CMD INSTALL configure.args and CC customization
....status config.status: creating src/Makevars ** libs gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib64/openmpi/1.2.7-gcc/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c RegQuery.c -o RegQuery.o gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\&...
Rmpi Segmentation fault
2009 Feb 06
2
Rmpi Segmentation fault
...ng ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/local/include -DMPI2 -DOPENMPI -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o gcc -std=gnu99 -I/usr/local/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/local/inc...
Rmpi installation trouble
2012 Oct 10
1
Rmpi installation trouble
...: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/local/include -DMPI2 -DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr...
Problem installing Rmpi with Open MPI
2012 Aug 29
2
Problem installing Rmpi with Open MPI
...creating src/Makevars ** libs gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/local//include -DMPI2 -DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr...
cannot load pbdMPI package after compilation
2013 Jun 07
1
cannot load pbdMPI package after compilation
...MPI >> MPI_INCLUDE_PATH = /opt/openmpi/1.6.4-1/intel-13.1.1/include >> MPI_LIBPATH = /opt/openmpi/1.6.4-1/intel-13.1.1/lib64 >> MPI_LIBS = -lutil -lpthread >> MPI_DEFS = -DMPI2 >> MPI_INCL2 = >> PKG_CPPFLAGS = -I/opt/openmpi/1.6.4-1/intel-13.1.1/include -DMPI2 -DOPENMPI >> PKG_LIBS = -L/opt/openmpi/1.6.4-1/intel-13.1.1/lib64 -lmpi -lutil -lpthread ************************************************************************* .. icc -std=gnu99 -I/usr/local/R/3.0.0/intel13/lib64/R/include -DNDEBUG -I/opt/openmpi/1.6.4-1/intel-13.1.1/include -DMPI2 -DOPENMPI -O3 -...
Problem in linking a library in R package
2013 Jun 16
2
Problem in linking a library in R package
...gt;> MPI_ROOT = /usr/lib/openmpi>> MPITYPE = OPENMPI>> MPI_INCLUDE_PATH = /usr/lib/openmpi/include>> MPI_LIBPATH = /usr/lib/openmpi/lib>> MPI_LIBS = -lutil -lpthread>> MPI_DEFS = -DMPI2>> MPI_INCL2 = >> PKG_CPPFLAGS = -I/usr/lib/openmpi/include -DMPI2 -DOPENMPI>> PKG_LIBS = -L/usr/lib/openmpi/lib -lmpi -lutil -lpthread ************************************************************************* configure: creating ./config.status config.status: creating src/Makevars configure: creating ./config.status config.status: creating src/Makevars config.statu...
trouble installing Rmpi on a debian machine
2012 Jul 05
1
trouble installing Rmpi on a debian machine
...-DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -I -DMPI2 -DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=...