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2006 Nov 08
1
get compressed data via a socket connection
...nswer with sequence data
>
request="extractseqs&lrank=2&format=\"fasta\"&operation=\"simple\"&zlib=T"
# now I try with zlib compression on
> writeLines(request, socket, sep = "\n") #
> seq <- readLines(socket , n = -1) # it doesno work
Warning message:
incomplete final line found by readLines on '->pbil.univ-lyon1.fr:5558'
>
Finaly I begin to create a C interface to get the compressed data from
the server. However I am wondering how I can pass a opened socket as
argument
to the C interface, especially w...