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On Fri, 29 Jan 2016 06:31, Keith Keller <kkeller at ...> wrote: > On 2016-01-29, reynierpm at gmail.com <reynierpm at gmail.com> wrote: >> >> I am building a Dockerfile and I am setting up MariaDB repos as follow: > > This question is probably way offtopic for a CentOS mailing list. > >> # Setup MariaDB repos >> RUN touch /etc/yum.repos.d/MariaDB.repo >> >> What's the right way to do this? The one below? >> >> echo...

I am building a Dockerfile and I am setting up MariaDB repos as follow: # Setup MariaDB repos RUN touch /etc/yum.repos.d/MariaDB.repo I should write this inside the MariaDB.repo file: [mariadb] name = MariaDB baseurl = http://yum.mariadb.org/5.5/centos6-amd64 gpgkey=https://yum.mariadb.org/RPM-GPG-KEY-MariaDB gpgchec...

My dockerfile: FROM python:3 WORKDIR /usr/src/app COPY requirements.txt ./ COPY languageserver-master ./ COPY radian-master ./ RUN pip3 install --no-cache-dir -r requirements.txt EXPOSE 8080 RUN apt-key adv --keyserver keys.gnupg.net --recv-key 'E19F5F87128899B192B1A2C2AD5F960A256A04AF' RUN echo &q...

I continue to receive an error installing R via dockerfile on a buster image python:3. E: The value 'buster-cran40' is invalid for APT::Default-Release as such a release is not available in the sources My starting point is the debian buster based Python:3 image adding a couple of python specific configurations and then using the commands in the R...

On 2016-01-29, reynierpm at gmail.com <reynierpm at gmail.com> wrote: > I am building a Dockerfile and I am setting up MariaDB repos as follow: This question is probably way offtopic for a CentOS mailing list. > # Setup MariaDB repos > RUN touch /etc/yum.repos.d/MariaDB.repo > > What's the right way to do this? The one below? > > echo "[mariadb]" >> &quot...

Lauren, On 15 October 2024 at 13:51, Gerber, Lauren J wrote: | I just tried fixing my script and added library(BiocManager) before library | (ggbreak), then rebuilt the image, and am still getting the same error. You need _two_ distinct commands. First install.packages("BiocManager") and second once that is done use it to install 'ggbreak' from BioConductor

I am working in a Dockerfile but there is a "secure" MariaDB server script I need to run which is interactive and I don't know how to deal with this. Basically this is the flow I have follow on the script at test environment and is the same I want to achieve in the Dockerfile without user interaction by just an...

Hi: I have a Dockerfile, which builds an image which installed R 3.3.2 in Ubuntu 14.04, but building using that Dockerfile seems to have stopped working and I am unclear why. I believe the relevant error is: Some packages could not be installed. This may mean that you have requested an impossible situation or if you ar...

...y (and have no clues about docker). Perhaps you can try to debug this on your end? And see what env_list is when the error occurs? Best -k > Exact environment where I am reproducing this issue is a fresh ubuntu, > no R packages pre-installed > docker pull registry.gitlab.com/jangorecki/dockerfiles/r-devel > https://gitlab.com/jangorecki/dockerfiles/-/raw/master/r-devel/Dockerfile > On Sat, Jun 27, 2020 at 12:37 AM Jan Gorecki <j.gorecki at wit.edu.pl> wrote: >> >> Hi R developers, >> >> On R-devel (2020-06-24 r78746) I am getting those two new excepti...

Am Donnerstag, 25. Juni 2020, 04:52:37 CEST schrieb Dave Lange: > My dockerfile: > ... > RUN apt update \ > && apt-get install -y --no-install-recommends \ > ca-certificates \ > wget \ > && rm -rf /var/lib/apt/lists/* Any reason why you remove the contents of /var/lib/apt/lists? On my system, this directory holds PGP signed information ab...

...s now up-to-date with R version 4.4.1. I first had to clear a bunch of unused data using docker system prune ?force. Apparently, it cleared over 32.53 gigs of data, and seemed to have been interfering with some of the package installations trying to take place. Next, I tried using part of Marco?s dockerfile and it helped solve the issue: RUN apt-get update \ && apt install -y \ software-properties-common \ dirmngr \ gnupg2 \ wget \ build-essential \ libcurl4-openssl-dev \ libxml2-dev \ libasound2 \ python3 \ python3-pip \...

...I am now back home where looking into these things is a little easier. From your first email to me, I started off with the selenium container you mentioned as your starting point. And that basically is your issue. It is a 'high-level' container, and it sets a user. (Essentially) all other Dockerfiles you have seen and been pointed at are 'lower-level' and operate as root -- so you need to inject 'sudo' calls. Otherwise it really is 'just' getting one key and adding one repo, but it helps to have had the same user <-> root issues before ... So below is a working...

On 24 June 2020 at 15:15, Dave Lange wrote: | I continue to receive an error installing R via dockerfile on a buster | image python:3. | E: The value 'buster-cran40' is invalid for APT::Default-Release as such a | release is not available in the sources Do you have the Dockerfile in public repo we can look at? | My starting point is the debian buster based Python:3 image adding a couple Th...

Lauren, little oversight from my Dockerfile, if you want to follow the CRAN steps and get the R from the cloud.r-project.org server, you want to replace && add-apt-repository -y "ppa:marutter/rrutter4.0" With && add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-c...

Yes, keep the $(lsb-release -cs) there. This allows you to change the version of the OS without having to change anything else (for instance we are migrating all of our docker to 24.04 LTS right now, so we only have to modify the FROM entry and all of our Dockerfile will still work). From: Gerber, Lauren J <lauren.gerber at helsinki.fi> Date: Thursday, July 11, 2024 at 2:21?AM To: marcoblanchette at icloud.com <marcoblanchette at icloud.com>, Dirk Eddelbuettel <edd at debian.org> Cc: Dirk Eddelbuettel <edd at debian.org>, r-sig-debia...

...ettel <edd at debian.org> Cc: Dirk Eddelbuettel <edd at debian.org>, r-sig-debian at r-project.org <r-sig-debian at r-project.org> Subject: Re: [R-sig-Debian] Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image Lauren, little oversight from my Dockerfile, if you want to follow the CRAN steps and get the R from the cloud.r-project.org server, you want to replace && add-apt-repository -y "ppa:marutter/rrutter4.0" With && add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-c...

Hi R developers, On R-devel (2020-06-24 r78746) I am getting those two new exceptions during R check. I found a change which eventually may be related https://github.com/wch/r-source/commit/69de92b9fb1b7f2a7c8d1394b8d56050881a5465 I think this may be a regression. I grep'ed package manuals and R code for unique.default but don't see any. Usage section of the unique method looks fine as

...n 8 July 2024 at 19:32, marcoblanchette at icloud.com wrote: | Oh, again, sorry for the spam but the problem Lauren is seeing is when she is | trying to sign the key. Installing gnugpg usually takes care of that problem. I am not sure about that. For jammy, my current (and used) rocker/r2u:jammy Dockerfile is https://github.com/rocker-org/r2u/blob/master/jammy/Dockerfile and it does what Laurent want (plus a bit more: r2u setup) but I have been traveling since she first emailed me and have not run it to confirm. Dirk -- dirk.eddelbuettel.com | @eddelbuettel | edd at debian.org

No sure why you?re doubting me but if one would like the minimal Dockerfile following the CRAN recommendations at https://cloud.r-project.org/bin/linux/ubuntu/, one would simply do FROM ubuntu:22.04 USER root ENV DEBIAN_FRONTEND noninteractive ## Configure Ubuntu for R install RUN apt update \ && apt install -y --no-install-recommends \ software-proper...

...r-project.org <r-sig-debian at r-project.org> Subject: Re: [R-sig-Debian] Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image On 8 July 2024 at 21:01, marcoblanchette at icloud.com wrote: | No sure why you?re doubting me but if one would like the minimal Dockerfile | following the CRAN recommendations at https://cloud.r-project.org/bin/linux/ | ubuntu/, one would simply do I am aware. I co-wrote those instructions. The Dockerfile I pointed to is newer, and regularly used by me and others. I still think you continue to answer questions that Lauren did not a...