Displaying 2 results from an estimated 2 matches for "distlm".
2010 Sep 21
1
partial dbRDA or CCA with two distance objects in Vegan.
...inters on this, ie which test is the
appropriate one to use ( I believe capscale since it is "similar to
distance-based redundancy analysis (Legendre & Anderson 1999)") and
whether this test is indeed equivalent to the approach suggested by
Legendre &Fortin, (Geffen et al used DISTLM).
many thanks
Nevil Amos
ACB
Monash University
references
(Geffen, E., M. J. Anderson, et al. (2004). "Climate and habitat
barriers to dispersal in the highly mobile grey wolf." Molecular Ecology
13(8): 2481-2490.)
LEGENDRE, P. and M.-J. FORTIN (2010). "Comparison of the Mantel...
2013 Dec 17
1
What is the formula of Pseudo-F statistic in capscale in vegan?
...i.e., testing for significance of a term
only after accounting for all preceding terms. Could someone please provide
us with either the actual formula for the pseudo-F statistic or a reference
that provides this formula?
We ask because we are doing the exact same analysis in another program
(using distLM in PRIMER 6 v 6.1.13 and PERMANOVA+ v 1.0.3 from PRIMER-E),
but we are getting very different pseudo-F ratios despite specifying the
exact same order of model terms, using the same Bray-Curtis distance measure
(distance matrices produced by the two programs are the same), and using the
same sequent...