search for: disequilibria

Displaying 2 results from an estimated 2 matches for "disequilibria".

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2006 Mar 12
0
New version of the LDheatmap package
Version 0.2 of the package LDheatmap is now on CRAN. The main function LDheatmap produces a graphical display, as a heat map, of measures of pairwise linkage disequilibria between SNPs. Users may optionally include the physical locations or genetic map distances of each SNP on the plot. The revisions to the package are aimed at improving the user's ability to modify and annotate the heatmap. Most notably, LDheatmap is now based on grid graphics. Examples of...
2005 Aug 04
1
linkage disequilibrium
Dear all, I'm using the package "Genetics", and I'm interested in the computation of D' statistics for Linkage Disequilibrium, for which the LD() command has been realised. Unfortunately I don't find any reference on "how" the D' is computed by the LD() function. In the package documentation it is generally referred as "MLE" estimation, but