search for: dinucleotide

Displaying 1 result from an estimated 1 matches for "dinucleotide".

Did you mean: dinucleotides
2012 Jan 16
1
rho stat from a fasta sequence file
Hi all, I have a sequence file (fasta format) and want to calculate the rho statistics for dinucleotide abundance value on my data.. the code which I use is (using seqinr library and current working directory) seq_info<-read.fasta("gene.txt") rho(seq_info[1],2) but it yields only the dinucleotides, not their rho values, i.e, > rho(seq_info[1],2) aa ac ag at ca cc cg ct ga gc gg gt...