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2006 Nov 10
2
Problems with metaMDS from vegan
...imitab <- read.table("r.csv", header = TRUE, row.names = 1, sep = ";") olimit <- max(simitab) distab <- simitab / olimit distab.dist <- vegdist(distab) k <- 2 meta <- metaMDS(distab.dist, distance="bray", k, trymax=50) postscript("metaMDS-CASE-DIMENd.ps", horizontal=TRUE) plot(meta$points, col="blue", xlab="Dim 1", ylab="Dim 2", main=sprintf("metaMDS f?r Variante = \"CASE\", dim = %d, Stress = %.2f %%", k, meta$stress)) text(meta$points+xinch(0.09), labels=names(distab), cex=0.8) ### Cut...