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Hi!I'm doing a little data importing from .cel files, > setwd("/home/mandova/celfiles") > mydata<-ReadAffy() Error in sub("^/?([^/]*/)*", "", filenames, extended = TRUE) : unused argument(s) (extended = TRUE) Then I tried > filenames<-paste("GSM",c(seq(138597,138617,1)),".cel",sep="") >

...n using a relatively current build of R-2.4.0 alpha, whereas the package builds just fine on R-2.3.1. Both versions of R were built from source. I'm hoping a guRu might be able to give some help. Some snippets from the build process: R-2.3.1 making DLL ... gcc -Ic:/R-2.3.1/src/extra/zlib -DHAVE_ZLIB -Ic:/R-2.3.1/include -Wall -O2 -c read_cdffile.c -o read_cdffile.o read_cdffile.c: In function `readQC': read_cdffile.c:565: warning: unused variable `param_unit' windres --include-dir c:/R-2.3.1/include -i makecdfenv_res.rc -o makecdfenv_res.o gcc -shared -s -o makecdfenv.dll makecdfe...

...SOURCE -DUSE_SSE41 -DUSE_GCC_ATOMIC_BUILTINS -DUSE_X86_64_ASM -DMAJOR_IN_SYSMACROS -DHAVE_SYS_SYSCTL_H -DHAVE_LINUX_FUTEX_H -DHAVE_ENDIAN_H -DHAVE_STRTOF -DHAVE_MKOSTEMP -DHAVE_POSIX_MEMALIGN -DHAVE_TIMESPEC_GET -DHAVE_MEMFD_CREATE -DHAVE_STRTOD_L -DHAVE_DLADDR -DHAVE_DL_ITERATE_PHDR -DHAVE_LIBDRM -DHAVE_ZLIB -DHAVE_PTHREAD -DHAVE_LLVM=0x0500 -DMESA_LLVM_VERSION_PATCH=1 -DHAVE_WAYLAND_PLATFORM -DWL_HIDE_DEPRECATED -DHAVE_DRI3 -Wall -fno-math-errno -fno-trapping-math -Wno-non-virtual-dtor -fno-rtti -march=native -O2 -march=native -O2 -fPIC -fvisibility=hidden -MD -MQ 'src/gallium/drivers/nouveau/src...

...iting R extensions' manual). The problem is: In my C code I have code conditional to a defined macro. I used autoconf the naive way (I am not an autoconf wizard) but the Makefile generated seems of no use. Forgetting the use of something like 'DEFS=@DEFS@' I tried to append say ' -DHAVE_ZLIB' to the 'CFLAGS' variable but it did not give anything. (note: I am using R-1.3.0... I plan to update) Any idea ? Thanking in advance... Laurent -- Laurent Gautier CBS, Building 208, DTU PhD. Student D-2800 Lyngby,Denmark tel: +45 45 25 24 85 http://www.cbs.dtu.dk/laur...