search for: dfcl

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2010 Nov 29
3
data.frame and formula classes of aggregate
...tion handles missing values differently depending if a data frame or a formula is the first argument ? For example, (d<- data.frame(sex=rep(0:1,each=3), wt=c(100,110,120,200,210,NA),ht=c(10,20,NA,30,40,50))) x1<- aggregate(d, by = list(d$sex), FUN = mean); names(x1)[3:4]<- c('mean.dfcl.wt','mean.dfcl.ht') x2<- aggregate(cbind(wt,ht)~sex,FUN=mean,data=d); names(x2)[2:3]<- c('mean.formcl.wt','mean.formcl.ht') cbind(x1,x2)[,c(2,3,6,4,7)] The output from the data.frame class has an NA if there are missing values in the group for the variable with...
2005 Sep 08
0
Effect of data set size on calculation
...which performs an ANOVA type of analysis on 2D GC data. The code is shown below: # ANOVA 2D GC analysis # maxc <- number of samples # nreps <- number of samples maxc <- 2 nreps <- 4 sscl <- NULL cmean <- NULL # # Initial stat. variable # dftot <- nrow(mat)-1 dfcl <- maxc - 1 dferr <- dftot - dfcl totmean <- mean(mat) sstot <- sd(mat)^2*dftot # # Calculate class-to-class variance # for (j in 1:maxc) { cmean <- rbind(cmean,mean(mat[((j-1)*nreps+1):((j-1)*nreps+nreps),])) } for (j in 1:ncol(mat)) { cmean[,j] <- cmean[,j]-totmea...