Displaying 1 result from an estimated 1 matches for "df2genind".
2018 Mar 15
3
stats 'dist' euclidean distance calculation
...locus
# Locus1 Locus2 Locus3
# Samp1 GG <NA> GG
# Samp2 AG CA GA
# Samp3 AG CA GG
# converts geno matrix to genind object (adegenet)
Mydata1 <- df2genind(locus, ploidy = 2, ind.names = ind[1:SAMPS], pop = population[1:SAMPS], sep="")
Mydata1$tab # get stats on newly created genind object
# Locus1.G Locus1.A Locus2.C Locus2.A Locus3.G Locus3.A
# Samp1 2 0 N...