search for: dcex1102shinypr

...",paste0(new,"/configure")) /tmp/RtmpMM6iC1/R.INSTALLc5ca415e4310/stringi/configure FALSE However, at the same time, in a separate session I have the system look at the very same file and clearly the execution bit is set. [root at dcex1102shinypr ~]# ls -l /tmp/RtmpMM6iC1/R.INSTALLc5ca415e4310/stringi total 312 -rwxr-xr-x 1 root root 66 Apr 2 2015 cleanup -rwxr-xr-x 1 root root 173757 Apr 7 11:43 configure -rw-r--r-- 1 root root 669 Jun 23 2015 configure.win -rw-r--r-- 1 root root 1451 Apr 7 15:08 DESCRIPTION drwxr-xr-x 2 root...

...uot;)) > /tmp/RtmpMM6iC1/R.INSTALLc5ca415e4310/stringi/configure > FALSE > > > However, at the same time, in a separate session I have the system look at the very same file and clearly the execution bit is set. > > > [root at dcex1102shinypr ~]# ls -l /tmp/RtmpMM6iC1/R.INSTALLc5ca415e4310/stringi > total 312 > -rwxr-xr-x 1 root root 66 Apr 2 2015 cleanup > -rwxr-xr-x 1 root root 173757 Apr 7 11:43 configure > -rw-r--r-- 1 root root 669 Jun 23 2015 configure.win > -rw-r--r-- 1 root root 1451 Apr 7 15:08 DESC...

...(tools:::.install_packages) > tools:::.install_packages("stringi_1.1.5.tar.gz") > > You can single step until you see the message, and try to diagnose why it is happening. > > Watch out, this function will exit R at the end. > > Duncan Murdoch > >> [meconk at dcex1102shinypr ~]$ ls -l stringi/configure -rwxr-xr-x 1 >> meconk meconk 173757 Apr 7 11:43 stringi/configure >> [meconk at dcex1102shinypr ~]$ sudo R [sudo] password for meconk: >> >> R version 3.4.0 (2017-04-21) -- "You Stupid Darkness" >> Copyright (C) 2017 The R Founda...

...uot;source"). 2. In R, run debug(tools:::.install_packages) tools:::.install_packages("stringi_1.1.5.tar.gz") You can single step until you see the message, and try to diagnose why it is happening. Watch out, this function will exit R at the end. Duncan Murdoch > [meconk at dcex1102shinypr ~]$ ls -l stringi/configure -rwxr-xr-x 1 > meconk meconk 173757 Apr 7 11:43 stringi/configure > [meconk at dcex1102shinypr ~]$ sudo R [sudo] password for meconk: > > R version 3.4.0 (2017-04-21) -- "You Stupid Darkness" > Copyright (C) 2017 The R Foundation for Statistic...

...to install via install.packages I get the same error. I also tried using R CMD INSTALL from the terminal and install.packages with a local file pointing to the very same tar.gz file that shows the executable bit set. All result in the same "configure is not executable" result. [meconk at dcex1102shinypr ~]$ ls -l stringi/configure -rwxr-xr-x 1 meconk meconk 173757 Apr 7 11:43 stringi/configure [meconk at dcex1102shinypr ~]$ sudo R [sudo] password for meconk: R version 3.4.0 (2017-04-21) -- "You Stupid Darkness" Copyright (C) 2017 The R Foundation for Statistical Computing Platform: x86...

...ot;source"). 2. In R, run debug(tools:::.install_packages) tools:::.install_packages("stringi_1.1.5.tar.gz") You can single step until you see the message, and try to diagnose why it is happening. Watch out, this function will exit R at the end. Duncan Murdoch > [meconk at dcex1102shinypr ~]$ ls -l stringi/configure > -rwxr-xr-x 1 meconk meconk 173757 Apr 7 11:43 stringi/configure > [meconk at dcex1102shinypr ~]$ sudo R > [sudo] password for meconk: > > R version 3.4.0 (2017-04-21) -- "You Stupid Darkness" > Copyright (C) 2017 The R Foundation for Statis...

The "configure exists but is not executable" problem is somewhat common on Windows, because there's usually no such thing as an executable bit there. (Cygwin does something to fake one, but Windows generally doesn't.) If you create a tarball there by default you get no executable bits marked in it. For a long time, R CMD build has dealt with this issue by using the

>>>>> David Winsemius <dwinsemius at comcast.net> >>>>> on Wed, 21 Jun 2017 18:04:13 -0700 writes: >> On Jun 21, 2017, at 1:39 PM, Conklin, Mike (GfK) <Mike.Conklin at gfk.com> wrote: >> >> I have a Ubuntu server with an R installation that has 384 packages installed. We are trying to replicate the system on a Red Hat