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...-DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 Link flags: -lxml2 -lz -lxml2 **************************************** configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/supports.R config.status: creating inst/scripts/RSXML.csh config.stat...

...csh creating R/zzz.R creating cleanup creating inst/scripts/RJava Copying the cleanup script to the scripts/ directory Building libRSNativeJava.so in /tmp/R.INSTALL.30363/SJava/src/RSJava if test ! -d /usr/lib/R/library/SJava/libs ; then \ mkdir /usr/lib/R/library/SJava/libs ; \ fi gcc -g -O2 -D_R_ -I/usr/lib/R/include -I/usr/lib/R/include/R_ext -I/tmp/R.INSTALL.30363/SJava/src/RSJava -I. -I/tmp/R.INSTALL.30363/SJava/inst/include -I/opt/lang/java/j2sdk1.4.2_01/include -I/opt/lang/java/j2sdk1.4.2_01/include/linux -c CtoJava.c gcc -g -O2 -D_R_ -I/usr/lib/R/include -I/usr/lib/R/include/R_ext...

...cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I. -g -pipe -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -I/usr/local/include -I/System/Library/Perl/5.8.6/darwin-thread-multi-2level/CORE -DPERL_POLLUTE -D_R_=1 -DUSE_R=1 -DUSE_TOPLEVEL_EXEC=1 -DWITH_R_IN_PERL=1 -msse3 -fPIC -g -O2 -march=nocona -c Converters.c -o Converters.o gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Fra...

...nst/scripts/RJava Copying the cleanup script to the scripts/ directory Building libRSNativeJava.so in /tmp/RtmpdcTvTv/R.INSTALL327b23c6/SJava/src/RSJava if test ! -d /usr/local/lib/R/site-library/SJava/libs ; then \ mkdir /usr/local/lib/R/site-library/SJava/libs ; \ fi gcc -std=gnu99 -g -O2 -D_R_ -I/usr/local/lib/R/include -I/usr/local/lib/R/include/R_ext -I/tmp/RtmpdcTvTv/R.INSTALL327b23c6/SJava/src/RSJava -I. -I/tmp/RtmpdcTvTv/R.INSTALL327b23c6/SJava/inst/include -I/usr/lib/jvm/java-6-sun/include -I/usr/lib/jvm/java-6-sun/include/linux -c CtoJava.c CtoJava.cweb:148: error: expected ...

...eating cleanup config.status: creating inst/scripts/RJava Copying the cleanup script to the scripts/ directory Building libRSNativeJava.so in /tmp/R.INSTALL.tf2988/SJava/src/RSJava if test ! -d /usr/local/lib/R/library/SJava/libs ; then \ mkdir /usr/local/lib/R/library/SJava/libs ; \ fi gcc -g -O2 -D_R_ -I/usr/local/lib/R/include -I/usr/local/lib/R/include/R_ext -I/tmp/R.INSTALL.tf2988/SJava/src/RSJava -I. -I/tmp/R.INSTALL.tf2988/SJava/inst/include -I/usr/java/jdk1.5.0_04//include -I/usr/java/jdk1.5.0_04//include/linux -c CtoJava.c CtoJava.cweb:215: error: static declaration of 'std_env' f...

...I/usr/local/include -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 Link flags: -L/usr/local/lib -lxml2 -lz -L/usr/local/lib -liconv -lm -lz -lxml2 **************************************** configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/supports.R config...

...R.pm config.status: creating R/perl5lib.R making target all in RinPerlMakefile gcc -m64 -std=gnu99 -I/usr/include/R -I. -D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/lib64/perl5/CORE -DPERL_POLLUTE -D_R_=1 -DUSE_R=1 -DUSE_TOPLEVEL_EXEC=1 -DWITH_R_IN_PERL=1 -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c Converters.c -o Converters.o Converters.c: In function 'makeForeignPerlReference': C...

...-I/usr/lib64/R/include -I/usr/lib64/R/include -I. ?-D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/gdbm ?-I/usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi/CORE ?-DPERL_POLLUTE ? -D_R_=1 -DUSE_R=1 -DUSE_TOPLEVEL_EXEC=1 -I/usr/local/include ? ?-fpic ?-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c Converters.c -o Converters.o Converters.c: In function 'fromPerl': Converters.c:297: warning: unused...

...... checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for GGOBI... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/lib/R/include -I/usr/local/lib/R/include -g -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/local/include/ggobi -I/usr/include/gtk-2.0 -I/usr/include/libxml2 -I/usr/lib/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/local/include -...

...... yes checking for LIBGLADE... yes checking for GTKMOZEMBED... configure: WARNING: firefox-gtkmozembed not found configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/usr/local/include -g -D_R_=1 -DUSE_R=1 -I/usr/local/include/gtk-2.0 -I/usr/local/lib/gtk-2.0/include -I/usr/local/include/atk-1.0 -I/usr/local/include/cairo -I/usr/local/include/pango-1.0 -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/libglade-2.0 -I/usr/local/include/gtk-2.0...

.../etc/i386/Makeconf   CYGWIN environment variable option "nodosfilewarning" turns off this warning.   Consult the user's guide for more details about POSIX paths:     http://cygwin.com/cygwin-ug-net/using.html#using-pathnames gcc  -I"C:/PROGRA~1/R/R-215~1.0/include" -DNDEBUG -D_R_=1 -DUSE_R=1 -mms-bitfields -I/include/gtk-2.0 -I/include/gdk-pixbuf-2.0 -I/../lib/gtk-2.0/include - I/include/atk-1.0 -I/include/cairo -I/include/pango-1.0 -I/include/glib-2.0 -I/../lib/glib-2.0/include -I/include/libxml2 -I/include -I/include/ggobi -IC:/ PROGRA~1/R/R-215~1.0/include -I/include/lib...

.../etc/i386/Makeconf   CYGWIN environment variable option "nodosfilewarning" turns off this warning.   Consult the user's guide for more details about POSIX paths:     http://cygwin.com/cygwin-ug-net/using.html#using-pathnames gcc  -I"C:/PROGRA~1/R/R-215~1.0/include" -DNDEBUG -D_R_=1 -DUSE_R=1 -mms-bitfields -I/include/gtk-2.0 -I/include/gdk-pixbuf-2.0 -I/../lib/gtk-2.0/include - I/include/atk-1.0 -I/include/cairo -I/include/pango-1.0 -I/include/glib-2.0 -I/../lib/glib-2.0/include -I/include/libxml2 -I/include -I/include/ggobi -IC:/ PROGRA~1/R/R-215~1.0/include -I/include/lib...

...gobi' ... checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for GGOBI... configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -g -DUSE_EXT_PTR=1 -D_R_=1 -fpic -g -O2 -c brush.c -o brush.o En el fichero inclu??do de brush.c:1: RSGGobi.h:5:22: error: GGobiAPI.h: No existe el fichero ?? directorio In file included from RSGGobi.h:6, from brush.c:1: conversion.h:174: error: expected ???=???, ???,???, ???;???, ???asm??? or ???...

...get the following error message: /usr/vac/bin/xlc_r -I/usr/local/lib/R/include -DLIBXML -I/opt/freeware/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -I. -DLIBXML2=1 -I/usr/local/include -O -qstrict -c DocParse.c -o DocParse.o "DocParse.c", line 113.29: 1506-280 (E) Function argument assignment between types "const unsigned char*" and "char*" is not allowed. and then more of the same on othe...

...ing for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for uintptr_t... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/lib/R/include -g -D_R_=1 -pthread -D_REENTRANT -I/usr/include/gtk-2.0 -I/usr/lib/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/directfb -I...

...ing for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for uintptr_t... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/lib/R/include -g -D_R_=1 -pthread -D_REENTRANT -I/usr/include/gtk-2.0 -I/usr/lib/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/gio-unix-2.0/ -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/directfb -I...

...lude -I/Library/Frameworks/R.framework/ Resources/include/i386 -I. -arch i386 -arch ppc -g -pipe -fno-common - DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -Wdeclaration-after- statement -I/usr/local/include -I/System/Library/Perl/5.8.8/darwin- thread-multi-2level/CORE -DPERL_POLLUTE -D_R_=1 -DUSE_R=1 - DUSE_TOPLEVEL_EXEC=1 -DWITH_R_IN_PERL=1 -msse3 -fPIC -g -O2 - march=nocona -c Converters.c -o Converters.o cc1: error: invalid option ?arch=nocona? lipo: can't open input file: /var/folders/qc/qcR--kvAHYGoOkmr3ZNtvk++ +TM/-Tmp-//cclHWEBN.out (No such file or directory) make...

...creating src/Makevars creating R/RSUtils.S creating inst/scripts/RSPerl.csh creating src/RinPerlMakefile creating src/Makefile.PL making RinPerlMakefile gcc -I/kumarj/projects/R-1.5.0/include -I. -Dbool=char -DHAS_BOOL -I/ usr/local/include -I/usr/lib/perl5/5.00503/i386-linux/CORE -DPERL_POLLUTE -D_R_ =1 -DUSE_R=1 -DUSE_TOPLEVEL_EXEC=1 -I/usr/local/include -D__NO_MATH_INLINES -miee e-fp -fPIC -g -O2 -c Converters.c -o Converters.o Converters.c: In function `RS_getHV': Converters.c:18: `dTHX' undeclared (first use in this function) Converters.c:18: (Each undeclared identifier is reporte...

Hi all, I need the power of R from within some of my Python programs... I use debian linux (woody) at home and windows XP at work (the latter is where I need to get things done!) This are my packages: R 1.8.0 Python 2.3 RSPython 0.5-3 This is what I've done: (1) Since the Windows Binary of RSPython is compiled against Python 2.2 I downloaded the tarball (2) Followed the instructions in

...g.status config.status: creating Makefile config.status: creating src/Makevars config.status: creating cleanup config.status: creating inst/scripts/RPython.csh config.status: creating inst/scripts/RPython.bsh ** libs gcc -std=gnu99 -I/usr/share/R/include -I../inst/include -I/usr/include/python2.6 -D_R_=1 -DUSE_R=1 -fpic -g -O2 -c GeneralConverters.c -o GeneralConverters.o In file included from ../inst/include/UserConverters.h:4, from GeneralConverters.c:1: ../inst/include/RPythonModule.h:4:20: error: Python.h: No such file or directory In file included from ../inst/include/...