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d30m1a
2013 Jun 22
1
metaMDS Error, Nan similar or negative values
...the error:
Square root transformation
Wisconsin double standardization
Error in distfun(comm, method = distance, ...) :
formal argument "method" matched by multiple actual arguments
When I checked the distance I see some of the distances are NaN as for
example some rows of dist matrix:
D3M1A NaN 1.000000000 1.000000000 1.000000000 1.000000000
1.000000000 NaN 1.000000000 1.000000000 NaN
::::
D3R1A NaN 1.000000000 1.000000000 1.000000000 1.000000000
1.000000000 NaN 1.000000000 1.000000000 NaN
I searched all the details of metaMDS where...