search for: d301a1

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2024 Jul 11
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...uture for other projects. Br, Lauren -- Lauren J. Gerber Bioinformatician Precision Systems Medicine (Kallioniemi) Research Group iCAN ? Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8) FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi From: marcoblanchette at icloud.com <marcoblanchette at icloud.com> Date: Wednesday, 10. July 2024 at 23.17 To: Gerber, Lauren J <lauren.gerber at helsinki.fi>, Dirk Eddelbuettel <edd...
2024 Jul 11
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...uture for other projects. Br, Lauren -- Lauren J. Gerber Bioinformatician Precision Systems Medicine (Kallioniemi) Research Group iCAN ? Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8) FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi From: marcoblanchette at icloud.com <marcoblanchette at icloud.com> Date: Wednesday, 10. July 2024 at 23.17 To: Gerber, Lauren J <lauren.gerber at helsinki.fi>, Dirk Eddelbuettel <edd...
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...t. Thank you all so much. Br, Lauren -- Lauren J. Gerber Bioinformatician Precision Systems Medicine (Kallioniemi) Research Group iCAN ? Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8) FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi From: Dirk Eddelbuettel <edd at debian.org> Date: Wednesday, 10. July 2024 at 19.09 To: Gerber, Lauren J <lauren.gerber at helsinki.fi> Cc: Dirk Eddelbuettel <edd at debian.org>, m...
2024 Oct 15
2
R Package: 'ggbreak' in Dockerfile
...in advance for your help. Br, Lauren -- Lauren J. Gerber Bioinformatician Precision Systems Medicine (Kallioniemi) Research Group iCAN Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8) FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi [[alternative HTML version deleted]]
2024 Oct 15
2
R Package: 'ggbreak' in Dockerfile
...in advance for your help. Br, Lauren -- Lauren J. Gerber Bioinformatician Precision Systems Medicine (Kallioniemi) Research Group iCAN ? Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8) FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi [[alternative HTML version deleted]]
2024 Oct 15
1
R Package: 'ggbreak' in Dockerfile
...any additional thoughts. Br, Lauren -- Lauren J. Gerber Bioinformatician Precision Systems Medicine (Kallioniemi) Research Group iCAN ? Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8) FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi From: James W. MacDonald <jmacdon at uw.edu> Date: Tuesday, 15. October 2024 at 16.22 To: Gerber, Lauren J <lauren.gerber at helsinki.fi>, r-sig-debian at r-project.org <r-sig-debian...
2024 Oct 15
1
R Package: 'ggbreak' in Dockerfile
Lauren, On 15 October 2024 at 13:51, Gerber, Lauren J wrote: | I just tried fixing my script and added library(BiocManager) before library | (ggbreak), then rebuilt the image, and am still getting the same error. You need _two_ distinct commands. First install.packages("BiocManager") and second once that is done use it to install 'ggbreak' from BioConductor
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...t. Thank you all so much. Br, Lauren -- Lauren J. Gerber Bioinformatician Precision Systems Medicine (Kallioniemi) Research Group iCAN ? Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8) FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi From: Dirk Eddelbuettel <edd at debian.org> Date: Wednesday, 10. July 2024 at 19.09 To: Gerber, Lauren J <lauren.gerber at helsinki.fi> Cc: Dirk Eddelbuettel <edd at debian.org>, m...
2024 Jul 09
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...ou so much for your help. Br, Lauren -- Lauren J. Gerber Bioinformatician Precision Systems Medicine (Kallioniemi) Research Group iCAN ? Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8) FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi From: Dirk Eddelbuettel <edd at debian.org> Date: Tuesday, 9. July 2024 at 9.13 To: marcoblanchette at icloud.com <marcoblanchette at icloud.com> Cc: Dirk Eddelbuettel <edd at debian....
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
Lauren, I am now back home where looking into these things is a little easier. From your first email to me, I started off with the selenium container you mentioned as your starting point. And that basically is your issue. It is a 'high-level' container, and it sets a user. (Essentially) all other Dockerfiles you have seen and been pointed at are 'lower-level' and operate as root