search for: cyto

...these on all three peers. hi guys I've recently upgraded from 3.8 to 3.10 and I'm seeing weird behavior. I see: $gluster vol status $_vol detail; takes long timeand mostly times out. I do: $ gluster vol heal $_vol info and I see: Brick 10.5.6.32:/__.aLocalStorages/0/0-GLUSTERs/0GLUSTER-CYTO-DATA Status: Transport endpoint is not connected Number of entries: - Brick 10.5.6.49:/__.aLocalStorages/0/0-GLUSTERs/0GLUSTER-CYTO-DATA Status: Connected Number of entries: 0 Brick 10.5.6.100:/__.aLocalStorages/0/0-GLUSTERs/0GLUSTER-CYTO-DATA Status: Transport endpoint is not connected Number...

...nn(accession, libname, main = "All samples") where accession was a vector containing the codes identifying the RNA sequences, and libname was a vector containing the codes identifying the tissue sample (library)." The structure of my data is as follows: R> structure(list(cyto = c("A", ?B?, ?C?, ?D?), nuc = c(?A?, ?B?, ?E?, ??), chrom = c(?B?, ?F?, ??, ??)),.Names = c("cyto", "Nuc", "chrom")) accession should be "A", "B",.... and libname schould be "cyto", "nuc" and "chrom" as I...

...rshd: readv on /var/run/gluster/0853a4555820d3442b1c3909f1cb8466.socket failed (No data available) [2017-09-28 16:00:56.122687] I [MSGID: 106568] [glusterd-svc-mgmt.c:228:glusterd_svc_stop] 0-management: glustershd service is stopped funnily(or not) I now see, a week after: gluster vol status CYTO-DATA Status of volume: CYTO-DATA Gluster process???????????????????????????? TCP Port? RDMA Port Online? Pid ------------------------------------------------------------------------------ Brick 10.5.6.49:/__.aLocalStorages/0/0-GLUS TERs/0GLUSTER-CYTO-DATA???????????????????? 49161???? 0 Y?????? 1...

...'ve recently upgraded from 3.8 to 3.10 and I'm seeing weird > behavior. > I see: $gluster vol status $_vol detail; takes long timeand > mostly times out. > I do: > $ gluster vol heal $_vol info > and I see: > Brick > 10.5.6.32:/__.aLocalStorages/0/0-GLUSTERs/0GLUSTER-CYTO-DATA > Status: Transport endpoint is not connected > Number of entries: - > > Brick > 10.5.6.49:/__.aLocalStorages/0/0-GLUSTERs/0GLUSTER-CYTO-DATA > Status: Connected > Number of entries: 0 > > Brick > 10.5.6.100:/__.aLocalStorages/0/0-GLUSTERs/0GLUSTER-CYTO-DATA >...

These symptoms appear to be the same as I've recorded in this post: http://lists.gluster.org/pipermail/gluster-users/2017-September/032435.html On Wed, Sep 13, 2017 at 7:01 AM, Atin Mukherjee <atin.mukherjee83 at gmail.com> wrote: > Additionally the brick log file of the same brick would be required. > Please look for if brick process went down or crashed. Doing a volume start

Additionally the brick log file of the same brick would be required. Please look for if brick process went down or crashed. Doing a volume start force should resolve the issue. On Wed, 13 Sep 2017 at 16:28, Gaurav Yadav <gyadav at redhat.com> wrote: > Please send me the logs as well i.e glusterd.logs and cmd_history.log. > > > On Wed, Sep 13, 2017 at 1:45 PM, lejeczek

...'plot' with type='b' i get the points connected with lines and one straigth line from the lowest datapoint to the highest data point. how can i avoid/remove it from the figure. i am using R2.9.1, below is the example of the data. od<-c(10, 8, 6,4,2,1, 10.5,7.8,6.4,3.8,2.1,0.95) cyto_conc=2650 # Highest cytokine concentration user defined cyto_std_conc <-c(cyto_conc) for (i in 1:5) { cyto_conc = cyto_conc /3 cyto_std_conc <-c(cyto_std_conc ,cyto_conc) } cyto_std_conc<-log2(rep(cyto_std_conc,2)) cyto<-cbind(cyto_std_conc,od) plot(cyto_std_conc,od, t...

...n intI(i, n = x at Dim[1], dn[[1]], give.dn = FALSE) : Index gr??er als maximales 6 # Test_adjac.csv A.A B.B C.C D.D E.E F.F A.A 0 0 5 5 5 5 B.B 4 0 1 1 1 1 C.C 5 5 0 5 4 2 D.D 5 0 5 0 5 3 E.E 5 1 5 5 0 4 F.F 1 2 3 4 5 5 # Test_cat.csv Names corresponding-NCP Category Subcategory_type sources.cyto source Factor A.A 7 hydrologic attribute "A" A 1 B.B 6, 11 hydrologic attribute "B" B 1 C.C 1, 14, 15, 16, 17, 18 AES intrinsic "C" C 0 D.D 1, 14, 15, 16, 17, 18 AES intrinsic "D" D 0 E.E 1, 14, 15, 16, 17, 18 AES intrinsic "E" E 0 F.F 7 AES mater...

...5???????4???????2 > D.D?????5???????0???????5???????0???????5???????3 > E.E?????5???????1???????5???????5???????0???????4 > F.F?????1???????2???????3???????4???????5???????5 > > # Test_cat.csv > Names???corresponding- > NCP???????Category????????Subcategory_type????????sources.cyto????sou > rce??Factor > A.A?????7???????hydrologic attribute????????????"A"?????A???????1 > B.B?????6, 11???hydrologic attribute????????????"B"?????B???????1 > C.C?????1, 14, 15, 16, 17, > 18???AES?????intrinsic???????"C"?????C???????0 > D.D?????1, 14,...

...: chr [1:128] "8/6/1997" "6/27/2000" "8/17/1998" "9/8/1997" ... > .. .. .. ..$ t(4;11) : logi [1:128] FALSE FALSE NA TRUE FALSE FALSE ... > .. .. .. ..$ t(9;22) : logi [1:128] TRUE FALSE NA FALSE FALSE FALSE ... > .. .. .. ..$ cyto.normal : logi [1:128] FALSE FALSE NA FALSE FALSE FALSE ... > .. .. .. ..$ citog : chr [1:128] "t(9;22)" "simple alt." NA "t(4;11)" ... > .. .. .. ..$ mol.biol : Factor w/ 6 levels "ALL1/AF4","BCR/ABL",..: 2 4 2 1 4 4 4 4 4 2...

...to compare different clustering parameters such as *K-means* clustering, Model Based Clustering, I have two queries: 1. How to incorporate different clustering method in the same code? 2. Is this possible to implement pvclust in the same code and cluster accordingly? library(gplots) #===========Cyto========= #x=read.table("Cyto_shoot.txt", header=TRUE) mat=data.matrix(x) heatmap.2(mat, # c('red','green','orange','blue','yellow', 'gray','black','brown','aquamarine3','cyan', 'darkmagenta','darkv...

...?5???????0???????5???????0???????5???????3 > > E.E?????5???????1???????5???????5???????0???????4 > > F.F?????1???????2???????3???????4???????5???????5 > > > > # Test_cat.csv > > Names???corresponding- > > NCP???????Category????????Subcategory_type????????sources.cyto????s > > ou > > rce??Factor > > A.A?????7???????hydrologic attribute????????????"A"?????A???????1 > > B.B?????6, 11???hydrologic attribute????????????"B"?????B???????1 > > C.C?????1, 14, 15, 16, 17, > > 18???AES?????intrinsic???????"C&quo...

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Dear community Find enclosed the full working example. Many thanks Sibylle Test_cat.csv Names Subcategory_type sources.cyto source Factor A.A material "A" A 1 B.B material "B" B 1 C.C regulation "C" C 1 D.D regulation "D" D 1 E.E habitat "E" E 1 F.F cultural "F" F 1 Test_adjac.csv A.A B.B C.C D.D E.E F.F A.A...

On 2/24/24 12:10, Kimmo Elo wrote: > Hi, > > first of all, your example was not reproducible! But once I added > "library(igraph)" and "library(scico)" plus generally replaced > "aes_collapsed" by "edge_list", I started to work :-) After copying your lead in that replacement the error I got was: network <-

...lo 08:59 +0100, sibylle.stoeckli at gmx.ch kirjoitti: > Dear community > > ? > > Find enclosed the full working example. > > ? > > Many thanks > > Sibylle > > ? > > Test_cat.csv > > > Names > > Subcategory_type > > sources.cyto > > source > > Factor > > > A.A > > material > > "A" > > A > > 1 > > > B.B > > material > > "B" > > B > > 1 > > > C.C > > regulation > > "C" > >...

...> > 5 0 5 0 5 3 E.E 5 1 5 > > 5 0 4 F.F 1 2 3 4 5 5 > > > > # Test_cat.csv > > Names corresponding- > > NCP Category Subcategory_type sources.cyto s > > ou rce Factor A.A 7 hydrologic attribute "A" > > A 1 B.B 6, 11 hydrologic attribute "B" B > > 1 C.C 1, 14, 15, 16, 17, > > 18 AES intrinsic "C" C 0...

Dear Sibylle, your example is not working! E.g. no data for "aes_collapsed". Best, Kimmo ke, 2024-03-20 kello 19:28 +0100, SIBYLLE ST?CKLI via R-help kirjoitti: > Dear community > > I am using ggraph to plot a network analysis. See part 2 in the working > example. > Besides different colors for different groups of nodes: > --> geom_node_point(aes(size =