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cnum
2007 Jan 22
0
Recursive-SVM (R-SVM)
...- pp-1
}
if( pp >= Nmin )
{
x[i+1] <- pp
} else
{
break
}
}
x
}
## R-SVM core code
## input:
## x: row matrix of data
## y: class label: 1 / -1 for 2 classes
## CVtype:
## integer: N fold CV
## "LOO": leave-one-out CV
## "bootstrape": bootstrape CV
## CVnum: number of CVs
## LOO: defined as sample size
## Nfold and bootstrape: user defined, default as sample size
## output: a named list
## Error: a vector of CV error on each level
## SelFreq: a matrix for the frequency of each gene being selected in each level
## with each column corresponds to...