search for: curated

...present stage and "N's" represent degree of disease spreading. I want to create output that looks like this: *Sample_Output_File* T N 1 0 2 1 0 0 1 0 0 3 As it currently stands, my code is the following: rm(list=ls()) source("../../functions.R") uncurated <- read.csv("../uncurated/Sample_Input_File_full_pdata.csv",as.is =TRUE,row.names=1) ##initial creation of curated dataframe curated <- initialCuratedDF(rownames(uncurated),template.filename="Sample_Template_File.csv") ##-------------------- ##start the mappings ##------...

I have 2 distinct types of users (artists and curators) in my system and they currently share all associations (eg has_one :portfolio). However, a curator shouldn''t have a portfolio so I would like to only add that association when required. Obviously I could just return nil for that method, but it doesn''t feel right having that there in the first place. What''s the best

...ot; and place it in the root directory such that I can call these functions from within the sub-folders in each type of cancer. My confusion is that I'm not sure of the syntax to make this happen. For example: Within the "Prostate_Cancer" folder, I have the following folders: "curated" AND "src" AND "uncurated" Within "uncurated" I have a ton of files, one of which could be: PMID5377_fullpdata.csv within "src" I have my R scripts, the one corresponding to the above "uncurated" file would be: PMID5377_curation.R Here's...

...2002 I want to make output like so: MONTH QUARTER YEAR 07 3 2012 07 3 2001 01 1 2002 I was having some trouble getting the regular expression to work. I think it should be something like the following: tmp <- uncurated$MONTH *tmp <- gsub("[^-\\d\\d]","",tmp,perl=TRUE)* *tmp[tmp=="-"] <- ""* *curated$MONTH <- tmp* * * tmp <- uncurated$QUARTER *tmp <- gsub("[^-\\d]","",tmp,perl=TRUE)* *tmp[tmp=="-"] <- ""* *curated$QUA...

Hello, Iam providing access to many images on a share to windows users from my linux samba over the internet. The problem is that I need thumbnail viewing because of the nature of this library and thumbnails take to much time to load it seems as though it is actually loading the entire image to then display the small thumbnail. Is this true? Also isnt there some kind of caching that can be

Hi, I'm trying to build a Forest Plot using the second and fourth columns in the table (test.csv) below. My code is the following: curated <- data.frame("test.csv") tmp <- curated$coef tmp1 <- curated$se_coef plt <- metaplot(tmp, tmp1, xlim = c(-.45, .45)) I keep getting the following error at the last line and am not sure why: Error in if (is.na(lower[i] + upper[i])) next : argument is of length zero For the...

...gs came up. I followed the leads and read the ?read.delim page; I tried changing header = TRUE, and row.names = TRUE-- but I've still been having trouble fixing it, so I would greatly appreciate any help you can provide. Here is my code: rm(list=ls()) source("../../functions.R") uncurated <- read.csv("../uncurated/GSE3141_full_pdata.csv", as.is =TRUE,row.names=1) celfile.dir <- "../../../DATA/GSE3141/RAW" ##initial creation of curated dataframe curated <- initialCuratedDF(rownames(uncurated), template.filename="template.csv") The error occur...

...", "J941/3"), pf_mcl = c(101L, 102L, 103L, 104L, 105L, 106L)), .Names = c("studyno", "pf_mcl"), row.names = c(NA, 6L), class = "data.frame") m <- merge(myDF1, myDF2, by="studyno", all.x=TRUE, all.y=FALSE, suffixes=c(".raw", ".curated")) The results are: > myDF1 studyno date pf_mcl year 1 J1000/9 2016-11-18 NA 2016 2 J895/7 2016-11-22 2 2016 3 J931/6 2016-11-30 3 2016 4 J666/6 2016-12-09 4 2016 5 J1000/9 2016-12-13 5 2016 6 J1000/9 2016-12-20 NA 2016 > myDF2 studyno pf_mcl 1...

Most people (even Eniripsa players) see Eniripsa solely as support characters. They are support characters, but to limit an Eniripsa to purely support status, one never realises an Eniripsa's true power. Alot of guides will tell you that Eniripsa are "leech fairies" for most levels, that is not the case if built properly. The important thing to remember when building a solo Eniripsa

Dear @William<mailto:wdunlap at tibco.com>, thanks for the feedback. I have tested it on the larger dataset and noticed that it created two variables, pf_raw and pf_curated. The output we were looking for, was one that takes the variable pf_mcl in curated dataset and replaces pf_mcl in matching rows within the raw dataset. @Eric<mailto:ericjberger at gmail.com>?s solution was able to achieve that. Nonetheless, we do appreciate your solution. Regards ---------...

On Fri, 11 Sep 2020 at 19:32, Hubert Tong via llvm-dev < llvm-dev at lists.llvm.org> wrote: > There seems to be a split between those who prefer to curate commits >> locally and present them in the PR (i.e. Method 3) as they are to be >> committed (i.e. squash/amend/etc from my workstation and push the result), >> and those who seem to feel that it is better to avoid

...ist(studyno = c("J740/4", "J1000/9", "J895/7", "J931/6", "J609/1", "J941/3"), pf_mcl = c(0L, 0L, 0L, 0L, 0L, 0L)), .Names = c("studyno", "pf_mcl"), row.names = c(NA, 6L), class = "data.frame") myDF2 is a well curated subset of myDF1. Some rows in the two datasets match based on "studyno", one may find that values are missing in myDF1$pf_mcl or the values are wrong. All I want to do is identify a matching row in myDF2 and populate myDF1$pf_mcl with the value in myDF2$pf_mcl. If a row does not match ba...

...ot;Barcode" are not in the same order. Then I want to add the information from "Batch" to the corresponding patient. My (incorrect) code is below: #batch tmp <- Input_File_2$Barcode tmp1 <- Input_File_1$bcr_patient_barcode for i in tmp for item in tmp1 if (tmp == tmp1) { curated$batch <- Input_File_2$Batch } Thanks! [[alternative HTML version deleted]]

Just to clarify: All the LLVM incubator repositories have "enforce linear history" enabled. Neither "Squash and Merge" or "Rebase and Merge" results in a Merge commit in the git history. Steve On Fri, Sep 11, 2020 at 3:32 PM Hubert Tong < hubert.reinterpretcast at gmail.com> wrote: > On Fri, Sep 11, 2020 at 6:12 PM Renato Golin <rengolin at

...g/PR22050 is a great example. I'm actually surprised LLVM > itself doesn't trip over this bug, and I suspect an innocent change to LLVM > could result in that. > > Do you think it's possible to spin a rc3 with a couple more patches to fix > this? I think David has already curated the patches and would be willing to > ensure they merge cleanly. I'm going to help review them as OK. My hope is > that this won't require a huge delay in 3.5.1, but what do you think? > > -Chandler > > On Fri, Dec 19, 2014 at 2:35 PM, Tom Stellard <tom at stellard.net&...

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Hi guys, My code (next 2 lines below) isn't doing what I'm expecting it to: tmp <- ifelse(uncurated$days_to_tumor_recurrence=="null","norecurrence","recurrence") curated$recurrence_status <- tmp I want the column "recurrence_status" in my output file to have values "recurrence" (if the input value had a number in the days_to_tumor_recurrence c...

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