Displaying 12 results from an estimated 12 matches for "cs_util".
2009 Feb 11
1
Problem with R using pgi compiler on x86_64
...hen I try to install "Matrix" everything is fine until the last step.
make[1]: Leaving directory `/tmp/R.INSTALL.TW3399/Matrix/src/AMD'
pgCC -L/usr/lib64 -L/usr/X11R6/lib64 -pgf90libs -o Matrix.so
CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o
chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o
dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o
dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o
lgCMatrix.o sparseQR.o SPQR.a CHOLMOD.a COLAMD.a AMD.a
-L/usr/local/apps/R/R-2.8.1/lib64/R/lib -lRlapack -lRblas -...
2010 Dec 01
1
Install package 'Matrix' problem
...cript.
I then tried to install a recommended package called Matrix. The compilation failed with the following messages,
.......
CC -library=stlport4 -G -L/opt/csw/lib/sparcv9 -L/opt/solstudio12.2/prod/lib/v9 -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a -L/apps/sparcv9/R-2.12.0/lib/R/lib -lRlapack -L/apps/sparcv9...
2009 Feb 21
1
R-devel/Linux x64/Sun Studio 12: Problem with Matrix
...e compilation crashes with the following message. The error
occurs during building of the recommended packages and also if Matrix is
compiled separately:
[...]
CC -G -lCstd -L/opt/sun/sunstudio12/lib/amd64 -o Matrix.so CHMfactor.o
Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o
cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o
dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o
dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o
CHOLMOD.a COLAMD.a AMD.a -L/home/user/R/R-devel/lib -lRlapack
-L/home/user/R/R-devel/lib -lRbla...
2009 Feb 11
1
Compiling Matrix on Solaris 10 x86-64 Sun Studio 12
...UNWspro/prod/include -I/usr/include -I/usr/sfw/include -KPIC -O -I/opt/SUNWspro/prod/include -c cs.c -o cs.o
cc -m64 -I/home/choid/bin/R281/lib/R/include -I./UFconfig -I/usr/local/include -I/opt/SUNWspro/prod/include -I/usr/include -I/usr/sfw/include -KPIC -O -I/opt/SUNWspro/prod/include -c cs_utils.c -o cs_utils.o
cc -m64 -I/home/choid/bin/R281/lib/R/include -I./UFconfig -I/usr/local/include -I/opt/SUNWspro/prod/include -I/usr/include -I/usr/sfw/include -KPIC -O -I/opt/SUNWspro/prod/include -c dense.c -o dense.o
cc -m64 -I/home/choid/bin/R281/lib/R/include -I./UFconfig -I/usr/local/inclu...
2012 Jul 24
1
igraph build problems
....o cs_ltsolve.o
cs_lu.o cs_lusol.o cs_malloc.o cs_maxtrans.o cs_multiply.o cs_norm.o
cs_permute.o cs_pinv.o cs_post.o cs_print.o cs_pvec.o cs_qr.o
cs_qrsol.o cs_randperm.o cs_reach.o cs_scatter.o cs_scc.o cs_schol.o
cs_spsolve.o cs_sqr.o cs_symperm.o cs_tdfs.o cs_transpose.o
cs_updown.o cs_usolve.o cs_util.o cs_utsolve.o decomposition.o
dgetv0.o distances.o dlaqrb.o dmout.o dnaitr.o dnapps.o dnaup2.o
dnaupd.o dnconv.o dneigh.o dneupd.o dngets.o dqueue.o drl_graph.o
drl_graph_3d.o drl_layout.o drl_layout_3d.o drl_parse.o dsaitr.o
dsapps.o dsaup2.o dsaupd.o dsconv.o dseigt.o dsesrt.o dseupd.o
dsgets.o...
2016 Aug 19
2
can't build from source: error: template with C linkage
Hi All,
Users have contacted me because they can not build MCMCglmm from source. All are using R 3.3.0 on various machines with different compilers
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.2) 5.4.0
g++ (Ubuntu 4.8.4-2ubuntu1~14.04.3) 4.8.4
Mac OS X El Capitan (version/compiler unspecified)
The issue seems to be with mixing C/C++ with the repeated error:
/usr/include/c++/5/bits/cpp_type_traits.h:118:3:
2010 Jul 27
1
R CMD build wiped my computer
...ons
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_usolve.c -o cs_usolve.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_util.c -o cs_util.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_utsolve.c -o cs_utsolve.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/includ...
2010 Jul 27
1
R CMD build wiped my computer
...ons
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_usolve.c -o cs_usolve.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_util.c -o cs_util.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_utsolve.c -o cs_utsolve.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/includ...
2016 Aug 19
1
can't build from source: error: template with C linkage
...pdown.o
> gcc -I/usr/share/R/include -DNDEBUG??????-fpic??-g -O2 -fstack-
> protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g??-O3 -Wall -pipe -pedantic -std=gnu99??-O3
> -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set-
> variable -c cs_util.c -o cs_util.o
> gcc -I/usr/share/R/include -DNDEBUG??????-fpic??-g -O2 -fstack-
> protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g??-O3 -Wall -pipe -pedantic -std=gnu99??-O3
> -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set-
> vari...
2010 Jul 27
1
R CMD build wiped my computer
...2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_usolve.c -o cs_usolve.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_util.c -o cs_util.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_utsolve.c -o cs_utsolve.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -f...
2016 Aug 19
0
can't build from source: error: template with C linkage
...able -c cs_updown.c -o cs_updown.o
gcc -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -pipe -pedantic -std=gnu99 -O3 -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set-variable -c cs_util.c -o cs_util.o
gcc -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -pipe -pedantic -std=gnu99 -O3 -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set-variable -c cs_utsolve.c -o cs_...
2016 Jan 04
2
R, AIX 64-bit builds - trying to understand root cause for message: "Error: Line starting 'Package: tools ...' is malformed!"
The bulk is on my forums - the final post for today is:
Results to date:
A. It looks like I am going to need a newer compiler for C - xlc/xlC V11
apparently does not understand this code:
"/data/prj/cran/R-3.2.3/src/main/memory.c", line 2149.31: 1506-046 (S)
Syntax error.
I will have to check if R-devel has different code before asking for
assistence.
+2139 #ifdef