Displaying 6 results from an estimated 6 matches for "cs_omega".
2016 Aug 19
2
can't build from source: error: template with C linkage
Hi All,
Users have contacted me because they can not build MCMCglmm from source. All are using R 3.3.0 on various machines with different compilers
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.2) 5.4.0
g++ (Ubuntu 4.8.4-2ubuntu1~14.04.3) 4.8.4
Mac OS X El Capitan (version/compiler unspecified)
The issue seems to be with mixing C/C++ with the repeated error:
/usr/include/c++/5/bits/cpp_type_traits.h:118:3:
2010 Jul 27
1
R CMD build wiped my computer
...eptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_norm.c -o cs_norm.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_omega.c -o cs_omega.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_omegaupdate.c -o cs_omegaupdate.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/loc...
2010 Jul 27
1
R CMD build wiped my computer
...eptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_norm.c -o cs_norm.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_omega.c -o cs_omega.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_omegaupdate.c -o cs_omegaupdate.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/loc...
2016 Aug 19
1
can't build from source: error: template with C linkage
..._norm.o
> gcc -I/usr/share/R/include -DNDEBUG??????-fpic??-g -O2 -fstack-
> protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g??-O3 -Wall -pipe -pedantic -std=gnu99??-O3
> -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set-
> variable -c cs_omegaupdate.c -o cs_omegaupdate.o
> gcc -I/usr/share/R/include -DNDEBUG??????-fpic??-g -O2 -fstack-
> protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -g??-O3 -Wall -pipe -pedantic -std=gnu99??-O3
> -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-s...
2010 Jul 27
1
R CMD build wiped my computer
...RCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_norm.c -o cs_norm.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_omega.c -o cs_omega.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
cs_omegaupdate.c -o cs_omegaupdate.o
gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/incl...
2016 Aug 19
0
can't build from source: error: template with C linkage
...variable -c cs_norm.c -o cs_norm.o
gcc -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -pipe -pedantic -std=gnu99 -O3 -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set-variable -c cs_omegaupdate.c -o cs_omegaupdate.o
gcc -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -pipe -pedantic -std=gnu99 -O3 -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set-variable -c cs_ome...