Displaying 13 results from an estimated 13 matches for "cran_ubuntu_key".
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...ll --yes --no-install-recommends ca-certificates locales wget
## but these are already installed
##
## So we skip to the next step of adding the key and repo
&& wget -q -O - https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| sudo tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& echo "deb [arch=amd64 signed-by=/etc/apt/trusted.gpg.d/cran_ubuntu_key.asc] https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/" \
| sudo tee -a /etc/apt/sources.list.d/cran.list \
##
## Update again and install R
&& sudo apt update -qqq \...
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...-dev \
libasound2 \
python3 \
python3-pip \
python3.10-venv \
git-all \
lsb-release \
libxml-twig-perl \
libc6-dev \
&& wget -q -O - https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository -y "ppa:marutter/rrutter4.0"
RUN apt-get update -y \
&& apt-get install -y r-base\
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/* /tmp/*
Then I ran my Docker image in interact...
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...apt-get install -y --no-install-recommends \
software-properties-common \
gnupg2 \
wget \
build-essential \
libcurl4-openssl-dev \
libxml2-dev \
&& wget -q -O - https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/"
RUN apt-get update -y \
&& apt-get install -y r-base\
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/...
2024 Jul 11
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...apt-get install -y --no-install-recommends \
software-properties-common \
gnupg2 \
wget \
build-essential \
libcurl4-openssl-dev \
libxml2-dev \
&& wget -q -O - https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/"
RUN apt-get update -y \
&& apt-get install -y r-base\
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/...
2024 Jul 11
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...apt-get install -y --no-install-recommends \
software-properties-common \
gnupg2 \
wget \
build-essential \
libcurl4-openssl-dev \
libxml2-dev \
&& wget -q -O - https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/"
RUN apt-get update -y \
&& apt-get install -y r-base\
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/...
2024 Jul 09
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
Hi Dirk and Marco,
I need to test some of the suggested solutions and circle back here.
Thank you so much for your help.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Institute for Molecular Medicine Finland (FIMM)
Nordic EMBL Partnership for Molecular Medicine
Biomedicum Helsinki 2U,
2024 Jul 08
2
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...st version (2.2.27-3ubuntu2.1).
software-properties-common is already the newest version (0.99.22.9).
0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
Next, I did this:
:/# wget -qO- https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc | sudo tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc
? This returned the public key.
Then, I checked this:
:/# gpg --show-keys /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc
? This showed that Michael Rutter?s key had been added (expiring 2027-09-30)
Then I ran this:
:/# add-apt-repository "deb https://cloud.r-p...
2024 Jul 08
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...l -y --no-install-recommends \
software-properties-common \
dirmngr \
gnupg2 \
wget \
build-essential \
libcurl4-openssl-dev \
libxml2-dev \
&& wget -q -O - https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository -y "ppa:marutter/rrutter4.0"
## Install R
RUN apt-get update -y \
&& apt-get install -y r-base\
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/* /tmp/*
## Configure parallel opti...
2024 Oct 15
2
R Package: 'ggbreak' in Dockerfile
...ound2t64 \
python3 \
python3-pip \
python3.11-venv \
# python3.12-venv \
git-all \
lsb-release \
libxml-twig-perl \
libc6-dev \
vim \
&& wget -q -O - https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository -y "ppa:marutter/rrutter4.0"
RUN apt-get update -y \
&& apt-get install -y r-base\
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/* /tmp/*
RUN pip3 install --upgrade pip wheel se...
2024 Jul 08
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
On 8 July 2024 at 19:32, marcoblanchette at icloud.com wrote:
| Oh, again, sorry for the spam but the problem Lauren is seeing is when she is
| trying to sign the key. Installing gnugpg usually takes care of that problem.
I am not sure about that.
For jammy, my current (and used) rocker/r2u:jammy Dockerfile is
https://github.com/rocker-org/r2u/blob/master/jammy/Dockerfile
and it does what
2024 Jul 08
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...ive
## Configure Ubuntu for R install
RUN apt update \
&& apt install -y --no-install-recommends \
software-properties-common \
gnupg2 \
wget \
&& wget -q -O - https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository -y "ppa:marutter/rrutter4.0"
## Install R
RUN apt update -y \
&& apt install -y r-base\
&& apt clean \
&& apt purge \
&& rm -rf /var/lib/apt/lists/* /tmp/*
Benefits of using Michael Rutter?s repo i...
2024 Oct 15
2
R Package: 'ggbreak' in Dockerfile
...erl \
libc6-dev \
vim \
&& wget -q -O - https://urldefense.com/v3/__https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc__;!!K-Hz7m0Vt54!j4qWJp3neZb132HVgGwaZ3mog2adnEcdl8X0OTb3wuUcviOwwus9E8QSsmCmKta8dZ-FmpzQOKC7qePXnj1qvC-XQQ$ \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository -y "ppa:marutter/rrutter4.0"
RUN apt-get update -y \
&& apt-get install -y r-base\
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/* /tmp/*
RUN pip3 install --upgrade pip wheel se...
2024 Oct 15
1
R Package: 'ggbreak' in Dockerfile
...b3wuUcviOwwus9E8QSsmCmKta8dZ-FmpzQOKC7qePXnj1qvC-XQQ$<https://urldefense.com/v3/__https:/cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc__;!!K-Hz7m0Vt54!j4qWJp3neZb132HVgGwaZ3mog2adnEcdl8X0OTb3wuUcviOwwus9E8QSsmCmKta8dZ-FmpzQOKC7qePXnj1qvC-XQQ$> \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository -y "ppa:marutter/rrutter4.0"
RUN apt-get update -y \
&& apt-get install -y r-base\
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/* /tmp/*
RUN pip3 install --upgrade pip wheel se...