search for: cpicflags

...he following error messages in this directory on the latest attempt: g77 -O2 -PIC -c loessf.f -o loessf.o gcc: unrecognized option `-PIC' g77 -O2 -PIC -c ppr.f -o ppr.o gcc: unrecognized option `-PIC' ... In config.site, I specifically requested the option FPICFLAGS=-fPIC, consistent with CPICFLAGS. I also set SHLIBLDFLAGS=-G in config.site. Furthermore, no errors or warnings about setting these flags in ./configure were encountered, since it (finally) found xmkmf. >From the man page, -w is a legitimate option for Gnu make (gmake on this system), so I'm at a loss how to proceed at t...

...libc6 | grep Architecture | uniq Architecture: amd64 Here's a patch which fixes the problem: $ svn diff configure Index: configure =================================================================== --- configure (revision 43265) +++ configure (working copy) @@ -32806,7 +32806,7 @@ cpicflags="-fPIC" ;; *) - cpicflags="-fpic" + cpicflags="-fPIC" ;; esac shlib_ldflags="-shared" @@ -32817,7 +32817,7 @@ fpicflags="-fPIC" ;; *) - fpicflags="-fpic" + fpicflags="-fP...

...is actually no PIC flag for DEC cc (with DU 4.0E) --- ./configure.in.alpha-patch Mon Aug 23 06:36:28 1999 +++ ./configure.in Sun Sep 12 17:38:27 1999 @@ -541,7 +541,9 @@ -bI:\$(R_HOME)/etc/R.exp -lc -lm" ;; alpha*osf*) + ldcmd="f77 -g -nofor_main -fpe3 " cpicflags= + shlibld=f77 shlibldflags=-shared ;; alpha*linux) @@ -612,7 +614,7 @@ : ${CPICFLAGS=${cpicflags}} if test -z "${CPICFLAGS}"; then AC_MSG_WARN([Could not determine CPICFLAGS.]) - AC_MSG_ERROR([See the file INSTALL for more information.]) +# AC_MSG_ERROR([See the fi...

...ib/R-1.7.0 >& configure.attempt.1 results in two things -- The first is that there seems to be a "-x" getting fed to the PG compilers, which is not a valid option. I don't know if this is the root problem ... The second (and seemingly fatal one) is "unable to determine CPICFLAGS". So -- I set it and try again ... setenv CPICFLAGS -kpic ./configure --prefix=/contrib/R-1.7.0 >& configure.attempt.2 which generates "unable to determine FPICFLAGS" ... and the same scenario is repeated several more times, with "the next" environment variable n...

...stead). The solution to this problem is to do the following: (a) insert a line MAKE = gmake in config.site; alternatively, set # env MAKE=gmake ./configure at the shell prompt (or setenv ... from the C shell). (b) in Makeconf.in, change FPICFLAGS = @FPICFLAGS@ to FPICFLAGS = @CPICFLAGS@, so that both FPICFLAGS and CPICFLAGS are the same (c) make the same change in etc/Makeconf.in If installing as su, you also need to make sure that /usr/openwin/bin is on the SUPATH; if not, you need to edit /etc/default/su as superuser. Otherwise, the configure script will not be able to...

I am building from source on RHEL 4 and have run into a problem while running "make check": running code in 'lapack.R' ...make[3]: *** [lapack.Rout] Error 1 make[3]: Leaving directory `/opt/R/R-2.9.1/tests' make[2]: *** [test-Specific] Error 2 make[2]: Leaving directory `/opt/R/R-2.9.1/tests' make[1]: *** [test-all-basics] Error 1 make[1]: Leaving

Hi, I cannot compile R with shared library. I am using Redhad Linux on Dell hardware. Here''s what I am doing: I set ?PICFLAGS in config.site file: CPICFLAGS=-fPIC FPICFLAGS=-fPIC and issue: ./configure --enable-R-shlib --prefix=$HOME/newR make configure finishes with no complaints, the last informative line being: Options enabled: shared R library, shared BLAS, R profiling, Java But make is upset: /usr/bin/ld: CConverters.o: relocati...

I would like to always use ${CC} for linking the main binary and the shlibs. Inspection of configure.in reveals that we currently deviate in the following cases: mainld shlibld aix[2-9]* ld ld alpha*osf* ${FC} -g -nofor_main -fpe3 ${FC} hpux* ${CC} ld Does anyone recall why we do not use ${CC} in these cases? Did anyone successfully build R on these platforms with ${CC} for

...than -O2. I get faster results with Goto BLAS rather than the R BLAS. Now I want to make icc and ifort work... So I tried this: ./configure CC=icc CFLAGS='-O3 -mp' CPPFLAGS=-I/opt/intel/cce/10.1.015/include/ F77=ifort CXX=icc CXXFLAGS='-O3 -mp' FFLAGS='-C90 -w90 -w95 -mp' CPICFLAGS=-shared CXXPICFLAGS=-shared FPICFLAGS=-shared SHLIB_LDFLAGS=-shared SHLIB_CXXLDFLAGS=-shared --with-blas="-L/usr/lib64/GotoBLAS -lgoto_penrynp-r1.26 -lpthread" I get six purported "bugs" in the config.log file (attached), but I hope there is something I've overlooked in the...

...crashes R, see later. *) the configure script seems to have a bug, even if you make your own configure script with autoconf. Perhaps it's only a typo, perhaps it's an error of autoconf. So you have to do some things manually: 1) run configure : (you have to adjust the paths) env CPICFLAGS=-shared CXXPICFLAGS=-shared FPICFLAGS=-shared SHLIB_LDFLAGS=-shared ./configure CC=icc CFLAGS=-O2 CPPFLAGS=-I/opt/intel/compiler70/ia32/include F77=ifc CXX=icc CXXFLAGS=O2 FFLAGS=-C90 2) delete a wrong path in some Makefiles: -L/usr/local/lib" The quotation mark is the wrong thing. Dele...

...o get these working on a RedHat Linux (or other Linux for that matter, which fortran compiler was used and what libraries linked is what I would like to know). My $RHOME /etc/Makeconf is I# Generated automatically from Makeconf.in by configure. # # ${R_HOME}/etc/Makeconf CC = gcc CFLAGS = -g -O2 CPICFLAGS = -fPIC CPPFLAGS = DEFS = -DHAVE_CONFIG_H FC = g77 FFLAGS = -g -O2 FLIBS = -L/usr/lib/gcc-lib/i386-redhat-linux/egcs-2.91.66 -L/usr/i386-redhat-linux/lib -lg2c -lm FPICFLAGS = -fPIC F2C = F2CFLAGS = SHLIBEXT = so SHLIBLD = gcc SHLIBLDFLAGS = -shared R_XTRA_CFLAGS = -mieee-fp R_XTRA_CPPFLAGS =...

...a couple problems configuring and making R 0.64 under linux, redhat 5.2 These problems didn't occur when I build 0.63.2 Any suggestions would be greatly appreciated. (1) configure generates the warning: "configure: warning: Cannot determine how to create shared libraries. Please set CPICFLAGS, FPICFLAGS and SHLIBLDFLAGS in `config.site'." I'm not sure what's needed here. The only flag I use to create shared libs is '-shared', but adding that to config.site not make the warning go away. (2) Apparently there are some X headers that make is not finding. Make ge...

..." package.tar.gz /NB: I have opnemp switched off here as it's not supported by Apple's GCC (4.2.1). When the code runs on a linux cluster it compiles with openmp and runs no problem./ *makevars file* CC = gcc -arch x86_64 -std=gnu99 CFLAGS = -g -O2 $(LTO) /# with -O2 we compile fine / CPICFLAGS = -fPIC CPPFLAGS = -I/usr/local/include CXX = g++ -arch x86_64 CXXCPP = g++ -arch x86_64 -E CXXFLAGS = -g $(LTO) CXXPICFLAGS = -fPIC ... compiles and installs no problem. However, if I remove the -O (or use -O0, -O1) it fails with the following error ** preparing package for lazy loading ** help...

...first referenced in file i_len xxxpr.o d_sign ../appl/libappl.a(dpoco.o) The compilers used are C: gcc version 2.81 FORTRAN: f2c (from the gnu download packet f2c-1993_04_28_tar.gz) The Makeconf reads: PACKAGE = R VERSION = 0.99.0 AR = ar AWK = gawk BLAS = blas.o CC = gcc CFLAGS = -g -O2 CPICFLAGS = -fPIC CPPFLAGS = DEFS = -DHAVE_CONFIG_H DLLFLAGS = DVIPS = false FC = FFLAGS = FLIBS = FPICFLAGS = -PIC F2C = f2c F2CFLAGS = GNOMEUI_LIBS = GNOME_LIBDIR = GNOME_INCLUDEDIR = INSTALL = $(top_srcdir)/tools/install-sh -c INSTALL_DATA = ${INSTALL} -m 644 INSTALL_PROGRAM = ${INSTALL} INSTALL_DIR = $...

...my latest attempt was ``` rm -rvf? "TMP/R-4.3.2" TMP/tmp.tar.gz mkdir -p TMP/R-4.3.2/lib/ wget -O TMP/tmp.tar.gz "https://pbil.univ-lyon1.fr/CRAN/src/base/R-4/R-4.3.2.tar.gz" cd TMP && tar xfz tmp.tar.gz && rm tmp.tar.gz &&? cd R-4.3.2 && \ ??? CPICFLAGS=fpic FPICFLAGS=fpic CXXPICFLAGS=fpic SHLIB_LDFLAGS=shared? SHLIB_CXXLDFLAGS=shared? ./configure --enable-R-static-lib --prefix=/path/to/TMP --with-x=no --disable-BLAS-shlib && make ``` witch gives the following error during configure: ``` configure: WARNING: you cannot build info or HTM...

Hi, i'm trying to compile R on a Cray XT3 using pgi/7.2.1 - CNL (compute node linux) The R version is 2.8.0 this is the option -enable-R-static-lib=yes --disable-R-shlib CPICFLAGS=fpic FPICFLAGS=fpic CXXPICFLAGS=fpic SHLIB_LDFLAGS=shared --with-x=no SHLIB_CXXLDFLAGS=shared --disable-BLAS-shlib CFLAGS="-g -O2 -Kieee" FFLAGS="-g -O2 -Kieee" CXXFLAGS="-g -O2 -Kieee" FCFLAGS="-g -O2 -Kieee" CC=cc F77=ftn CXX=CC FC=ftn R is now configured...

...kage ?Matrix? * Removing ?/home/user/R/R-devel/library/Matrix? Can someone help me or give me a pointer what I'm making wrong? How can I get/include the missing shared library? Many thanks in advance Thomas Petzoldt #file: config.site CC=cc CFLAGS="-xO5 -xc99 -xlibmil -nofstore" CPICFLAGS=-Kpic F77=f95 FFLAGS="-O5 -libmil -nofstore" FPICFLAGS=-Kpic CXX=CC CXXFLAGS="-xO5 -xlibmil -nofstore" CXXPICFLAGS=-Kpic FC=f95 FCFLAGS=$FFLAGS FCPICFLAGS=-Kpic LDFLAGS=-L/opt/sun/sunstudio12/lib/amd64 SHLIB_LDFLAGS=-shared SHLIB_CXXLDFLAGS="-G -lCstd" SHLIB_FCLDFLAGS=...

...Makeconf' line 64: Must be a separator (: or ::) for rules (bu39) -------------------------------------------- Here is 'Makeconf': ------------------------- pauling 4% cat Makeconf PACKAGE = @PACKAGE@ VERSION = @VERSION@ AR = @AR@ AWK = @AWK@ BLAS = @BLAS@ CC = @CC@ CFLAGS = @CFLAGS@ CPICFLAGS = @CPICFLAGS@ CPPFLAGS = @CPPFLAGS@ DEFS = @DEFS@ DLLFLAGS = @DLLFLAGS@ DVIPS = @DVIPS@ FC = @FC@ FFLAGS = @FFLAGS@ FLIBS = @FLIBS@ FPICFLAGS = @FPICFLAGS@ F2C = @F2C@ F2CFLAGS = @F2CFLAGS@ GNOMEUI_LIBS = @GNOMEUI_LIBS@ GNOME_LIBDIR = @GNOME_LIBDIR@ GNOME_INCLUDEDIR = @GNOME_INCLUDEDIR@ INSTALL = @...

...ving directory `/home/andy/Rbuild/R221-pgi/src' make: *** [R] Error 1 I configured it as follows: ~/Rbuild/R-patched/configure \ PG_HOME=/usr/pgi/linux86-64/6.1 \ CC=pgcc \ CFLAGS="-O2 -Kieee" \ CPPFLAGS="-I$PG_HOME/include -I$PG_HOME/include/CC" \ CPICFLAGS=-fpic \ F77=pgf77 \ FFLAGS="-Kieee"\ FPICFLAGS=-fpic \ CXX=pgCC \ CXXFLAGS="-Kieee"\ CXXPICFLAGS=-fpic \ SHLIB_CXXLDFLAGS=-shared \ SHLIB_LDFLAGS=-shared \ LDFLAGS="-L$PG_HOME/libso -L/usr/lib64" \ --with-blas="-L/...

...y(pi, n = 10) - 2:5 [1] 0 0 0 0 and can pass the arith-true.R test. The configuration is as follows: export PG_HOME=/usr/pgi/linux86-64/6.1 ~/Rbuild/R-patched/configure \ CC=pgcc \ CFLAGS="-g -Kieee" \ CPPFLAGS="-I$PG_HOME/include -I$PG_HOME/include/CC" \ CPICFLAGS=-fpic \ F77=pgf95 \ FFLAGS="-g -Kieee"\ FPICFLAGS=-fpic \ CXX=pgCC \ CXXFLAGS="-g -Kieee" \ CXXPICFLAGS=-fpic \ SHLIB_CXXLDFLAGS=-shared \ SHLIB_LDFLAGS=-shared \ LDFLAGS="-L$PG_HOME/libso -L/usr/lib64 -L/usr/X11R6/lib64" \...