Displaying 3 results from an estimated 3 matches for "coxmevar".
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colmenar
2020 Jan 13
0
Error in R CMD check --as-cran ?
...LSE)
??? }
??? if (missing(varlist) || is.null(varlist)) {
??????? varlist <- vector('list', nrandom)
??????? for (i in 1:nrandom) varlist[[i]] <- coxmeFull() #default
??? }
??? else {
??????? if (is.function(varlist)) varlist <- varlist()
??????? if (inherits(varlist, 'coxmevar')) varlist <- list(varlist)
??????? else if (ismat(varlist))
??????????? varlist <- list(coxmeMlist(list(varlist)))
??????? else {
??????????? if (!is.list(varlist)) stop("Invalid varlist argument")
??????????? if (all(sapply(varlist, ismat))) {
??????????????? # A list of...
2020 Jan 13
0
as-cran issue
...tools:::.check_packages. You can run it in an R session using
options(warn = 2, error = recover)
tools:::.check_packages(c("--as-cran", "coxme_2.2-14.tar.gz"))
When I do that I get a different error report; it reports this test instead:
if(class(varlist) == "coxmevar")
That appears in a number of places in the coxme source, and clearly
needs to be updated to use inherits().
Duncan Murdoch
2020 Jan 13
5
as-cran issue
Where can I find out (and replicate) what options as-cran turns on?
The issue: the following lines generate an error in R CMD check --as-cran? for coxme.? But
there is no error without as-cran nor is there one when I run the code in a terminal window.
ismat <- function(x)? inherits(x, "matrix") || inherits(x, "bdsmatrix") || inherits(x,
"Matrix")
if