search for: concs

Displaying 20 results from an estimated 231 matches for "concs".

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2010 Apr 26
1
finite difference scheme for 2D differential equations
Hello everyone, I am trying to solve 2D differential equations using finite difference scheme in R. I have been able to work with the equations with only one spatial dimensions but I want to extend it to the two dimensional problem. For example i can simulate one dimensional diffusion using a code like the following. But I want to write a similar code for,say, a two dimensional diffusion
2005 Oct 11
2
Problems with plot function
Hello all R users, My simulation function works correctly, but I have problems with plot function. You will find the following code using it. Thank you for your help ##################################################" simulation <- function(k, n){ conc <- seq(0,10,by=0.5) #choixg <- seq(1, length(conc)) choixg <- rep(0,length(conc)) for (i in 1:length(conc)){ choixg[i]
2005 Oct 13
1
problems with loop and plot function
Hi all R users, I have problems with my second loop for drawing the three curves in the same graphic. I need help please Thank you in advance ######################################################################### simulation <- function(k, n){ conc <- seq(0,100,by=0.5) #choixg <- seq(1, length(conc)) choixg <- rep(0,length(conc)) for (i in 1:length(conc)){ choixg[i] <- (k
2005 Apr 19
3
Help with predict.lm
Hi I have measured the UV absorbance (abs) of 10 solutions of a substance at known concentrations (conc) and have used a linear model to plot a calibration graph with confidence limits. I now want to predict the concentration of solutions with UV absorbance results given in the new.abs data.frame, however predict.lm only appears to work for new "conc" variables not new "abs"
2023 Oct 24
2
How to Calculate the Mean by Multiple Groups in R
Hi, I think you're misunderstanding which set of variables go on either side of the formula. Is this what you're looking for? > aggregate(OD ~ Time + Target + Conc, data = df, FUN = "mean") Time Target Conc OD 1 1 BACT 1 765.3333 2 1 BACT 2 745.3333 3 1 BACT 3 675.0000 > aggregate(ODnorm ~ Time + Target + Conc, data = df, FUN =
2007 Jul 16
5
formula(CO2)
The formula attribute of the builtin CO2 dataset seems a bit strange: > formula(CO2) Plant ~ Type + Treatment + conc + uptake What is one supposed to do with that? Certainly its not suitable for input to lm and none of the examples in ?CO2 use the above.
2008 Nov 11
2
strsplit (regex)
#how do I break these up into first two letters (RM), number, and then the last part #is there an easily accessible regex tutorial on the internet? v = (structure(1:122, .Label = c("RM215Temp", "RM215SpCond", "RM215DO.Conc", "RM215Depth", "RM215pH", "RM215ORP", "RM215Turbidity.", "RM215Battery", "RM215DO.",
2012 Aug 07
2
Passing arguments to a function within a function ...
Hallo Everybody How do you specify arguments for a function used within another function? Here is my problem: I am reconstructing a calculator for the burden of disease due to air pollution from publications and tools published by the WHO. The calculations make use of published dose-response relationships for particular health end-points. This is then applied to populations with known or
2006 Jul 18
2
Using corStruct in nlme
I am having trouble fitting correlation structures within nlme. I would like to fit corCAR1, corGaus and corExp correlation structures to my data. I either get the error "step halving reduced below minimum in pnls step" or alternatively R crashes. My dataset is similar to the CO2 example in the nlme package. The one major difference is that in my case the 'conc' steps are
2012 Nov 09
9
lm function - strange error
I am following a document teaching how to use regression and right at the onset I get an R error. I understand that variables "conc" and "signal" should have the same length but I am using the what R manual suggests to drop the error and it is not cooperating. What gives? The manual says that the default is na.ombit by the way, not that it's addition does anything How
2023 Oct 24
1
How to Calculate the Mean by Multiple Groups in R
Also, > aggregate(cbind(OD, ODnorm) ~ Time + Target + Conc, data = df, FUN = "mean") Time Target Conc OD ODnorm 1 1 BACT 1 765.3333 108.33333 2 1 BACT 2 745.3333 88.33333 3 1 BACT 3 675.0000 18.00000 (You might wish for "cbind(OD,ODnorm) ~ . - Well", but aggregate.formula is not smart enough for that.) -pd > On 24 Oct 2023, at
2004 Aug 16
2
using nls to fit a four parameter logistic model
Shalini Raghavan 3M Pharmaceuticals Research Building 270-03-A-10, 3M Center St. Paul, MN 55144 E-mail: sraghavan at mmm.com Tel: 651-736-2575 Fax: 651-733-5096 ----- Forwarded by Shalini Raghavan/US-Corporate/3M/US on 08/16/2004 11:25 AM ----- Shalini
2005 Sep 14
1
Long lines with Sweave
I have used Sweave a lot the latest year, but never really used any long function calls. If I have code which look like this ------------------------------------------------------------- gof <- benthic.flux(ID="Gulf of Finland", meas.conc=conc, bw.conc=bw.conc, time=times,
2023 Oct 24
2
How to Calculate the Mean by Multiple Groups in R
Hello, I have a data frame with different groups (Time, Target, Conc) and each entry has a triplicate value of the measurements OD and ODnorm. How can I merge the triplicates into a single mean value? I tried the following: ``` df = data.frame(Time=rep(1, 9), Well=paste("A", 1:9, sep=""), OD=c(666, 815, 815, 702, 739, 795, 657, 705, 663),
2023 Jul 02
0
How to plot both lines and points by group on ggplot2
Thank you that is exactly it! The problem was to connect each point of the series 'Conc' with a line. Best regards Luigi On Sat, Jul 1, 2023 at 8:33?PM Chris Evans <chrishold at psyctc.org> wrote: > > > On 01/07/2023 19:20, Luigi Marongiu wrote: > > Hello, > > I have a dataframe with measurements stratified by the concentration > > of a certain substance.
2003 Oct 30
2
'nls' and its arguments
Dear R experts! I'd to fit data by 'nls' with me-supplied function 'fcn'. 1) I'd like 'fcn' to accept arbitrary arguments, i.e. I defined it as f(...) {<body>}. (Ok, that's not actually impotant). 2) Second, I would NOT like to supply every parameter in the formula. To illustrate this, let's look at the last example of 'nls' help
2009 Sep 03
2
dividing a dataframe column by different constants
Dear R users, today I've got the following problem. Here you are a dataframe as example. There are some SAMPLES for which a CONCentration was recorded through TIME. The time during which the concentration was recorded is not always the same, 10 points for Sample A, 7 points for Sample B and 11 for sample C Also the initial concentration was not the same for the three samples. I would like
2009 Dec 18
2
NLS-Weibull-ERROR
Hello I was trying to estimate the weibull model using nls after putting OLS values as the initial inputs to NLS. I tried multiple times but still i m getting the same error of Error in nlsModel(formula, mf, start, wts) : singular gradient matrix at initial parameter estimates. The Program is as below > vel <- c(1,2,3,4,5,6,7,8,9,10,11,12,13,14) > df <- data.frame(conc, vel) >
2012 Mar 27
4
Help on predict.lm
Hello, I'm new here, but will try to be as specific and complete as possible. I'm trying to use “lm“ to first estimate parameter values from a set of calibration measurements, and then later to use those estimates to calculate another set of values with “predict.lm”. First I have a calibration dataset of absorbance values measured from standard solutions with known concentration of
2007 Jun 04
0
nls problems
Hi, All: The following identifies apparent inconsistencies and proposed fixes between the documentation and the behavior of 'nls'. Specifically, the help file says 'data' 'Can also be a list'. However, I got an error when I tried it with a list that could not be coerced to a data.frame. This is documented in the first example below. Also, the