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2017 Jun 08
1
DESeq2 pairwise compasion
There are two line 216 and 218
Three development stages 5 WEEK (5W), 7W, 9W.
Three tissue: Ca, Co, Pa
each with 2 biological replicate.
With two biological replicate. I want to do differential gene expression
analysis using DESeq2 so I tried these codes after reading about DESeq2:
,my aim is to do the pairwise comparison. how to make colData and design
formula.
library("DESeq2")