Displaying 1 result from an estimated 1 matches for "chromosome_name".
2009 Jun 16
1
Error using getBM() to query BioMart archives
...t=mart)
I'm able to list the available attributes and filters just fine, but
when I attempt to actually retrieve data using getBM() I receive the
following error:
> genes<-getBM(attributes=c("ensembl_gene_id", "external_gene_id",
"description", "chromosome_name", "start_position", "transcript_start"),
+ filters=c("chromosome_name","start","end"),
+ values=list(12,40000000,70000000),
+ mart=mart)
Error in listFilters(mart, what = "type") :
The function argument 'what' contains an i...