search for: chr21

Need way to resize an existing graphics window. This should be applicable across platforms (as part of a package). Context: function1() draws main plot (I'm using grid), function2() adds smaller plot above main plot, but this one can sometimes overflow the original graphics window area. Thanks, Sigal

...chr8 146364022 10 chr9 141213431 11 chr10 135534747 12 chr11 135006516 13 chr12 133851895 14 chr13 115169878 15 chr14 107349540 16 chr15 102531392 17 chr16 90354753 18 chr17 81195210 19 chr18 78077248 20 chr20 63025520 21 chrY 59373566 22 chr19 59128983 23 chr22 51304566 24 chr21 48129895 I want to drop the "chr" and order the chrom column in ascending order with X & Y at the end. I have tried converting the chrom into a character vector and using the strsplit function, but then I have to circle back and do a lot of editing to make it work. I could do thi...

...;chr5", "chr6", "chr7", "chr8", "chr9", "chr10", "chr11", "chr12", "chr13", "chr14", "chr15", "chr16", "chr17", "chr18", "chr19", "chr20", "chr21", "chr22", "chrX", "chrY") #access/group the by subset of annotation annotGr <- exons(txdb) #annotGr <- cds(txdb) wholeGenomeMatch <- function() { for(i in chrList) { #matches on plus strand matches.plus.strand <- matchPattern(query.p...