search for: cce

Dear All, I am trying to compile R-3.0 on Cray xe6 (HLRS) HERMIT, no success so far. Here is my experience: I use this to configure and make R: CC="cc" \ CXX="CC" \ F77="ftn" \ FC="ftn" \ CPPFLAGS="-I$PREFIX/include" \ LDFLAGS="-L$PREFIX/lib${LIBDIRSUFFIX}" \ ./configure --prefix=$PREFIX \ --exec-prefix=$PREFIX...

...r, it seems that there is no consensus as to how to benchmark R. I realize such a task is not trivial, nor controversial, but does anyone have a set of time-consuming tasks that can be used to compare R installations? It would seem logical that such a benchmark would include sub-benchmarks on file access, interpreted intensive tasks, C intensive tasks, BLAS intensive tasks, etc. You developers know more about this than I do, but I know enough to realize that there won't be one simple answer. Nevertheless, I'd like to make my usage decisions on something rather than anedotal claims. So, d...

...s. That seems to work OK with gcc and gfortran. I get about 10% faster computations by using -O3 rather than -O2. I get faster results with Goto BLAS rather than the R BLAS. Now I want to make icc and ifort work... So I tried this: ./configure CC=icc CFLAGS='-O3 -mp' CPPFLAGS=-I/opt/intel/cce/10.1.015/include/ F77=ifort CXX=icc CXXFLAGS='-O3 -mp' FFLAGS='-C90 -w90 -w95 -mp' CPICFLAGS=-shared CXXPICFLAGS=-shared FPICFLAGS=-shared SHLIB_LDFLAGS=-shared SHLIB_CXXLDFLAGS=-shared --with-blas="-L/usr/lib64/GotoBLAS -lgoto_penrynp-r1.26 -lpthread" I get six purported...

...e in the book. Could it be sum of squares problem (type III vs. type I)? Milliken & Johnson use SAS for calculations and this is program the used: proc mixed data=mmacov method=type3; class type; model time=type bstime*type/solution noint. My R code is: LME.1=lme(time~bstime:type+type-1,data=CCE,random=~1|type) and summary is: Value Std.Error DF t-value p-value typeBlue M&M 18.0 18.5 0 0.97 NaN typeButton 21.6 14.1 0 1.53 NaN typeChoc...

I am having trouble compiling R-2.6.2 on suse linux x86_64 using the intel compiler. I read section C.2.1 Intel compilers in the R Installation and Administration manual, and put CC=icc CFLAGS="-g -O3 -wd188 -ip" F77=ifort FFLAGS="-g -O3" ICC_LIBS=/opt/intel/cce/10.1.012/lib IFC_LIBS=/opt/intel/fce/10.1.012/lib/ LDFLAGS="-L$ICC_LIBS -L$IFC_LIBS -L/usr/lib64" CXX=icpc CXXFLAGS="-g -O3" FC=ifort FCFLAGS="-g -O3 -mp" in my config.site. Everything seems to compile alright, up until making the recommended package MASS. The outpu...

...shot). This box was running 4.6 /w vinum on same hard drives for the last 4 months wonderfully... but since it is my current 'scratch/backup' box, I just reinstalled with -STABLE. # uname -a FreeBSD polya.axista.com 4.8-STABLE FreeBSD 4.8-STABLE #22: Tue Jun 24 17:01:07 EDT 2003 cce@cantor.local:/usr/obj/usr/src/sys/GENERIC i386 Anyway, my problems seem to be coming from a disklabel issue. Following the instructions in the handbook (for disk addition), I go through the following steps: # dd if=/dev/zero of=/dev/ad2 bs=1k count=1 # fdisk -BI ad2 # disklabel -B -w -r...

I was testing ocfs2 on a 2 node cluster set up. ocfs2-tools version is 1.6.3 ocfs2 kernel version is 2.6.36 Using cman on 2 nodes node02 dw # ping_pong -rwm /data/test.dat 3 data increment = 2 14 locks/sec node01 dw # ping_pong -rw /data/test.dat 3 data increment = 2 10 locks/sec node02 dw # ping_pong -r /data/test.dat 3 1980 locks/sec Using cman on 1 node node02 dw #

...LLVM to target MSP430 microcontrollers. Anton wrote an MSP430 backend as an exercise, and some of the nastiest parts are done (thanks Anton!), but the consensus seems to be that there's still quite a bit of work left to do before LLVM can replace the commercial and open-source compilers (IAR, CCE, CrossWorks, mspgcc, and so on) that people use. I've created a mailing list where we can have graphic, detailed discussions of the MSP430 and its LLVM backend. Feel free to subscribe for discussion and/or lurking. http://lists.ransford.org/mailman/listinfo/llvm-msp430 We'll try to re...

...3-released Github - https://github.com/projectfedena/fedena Download instructions - http://projectfedena.org/download Fedena now powers more than 40,000 institutions around the world. It includes the most notable implementation in 15,000 Schools of Kerala - India, which is now a case study for successful implementation of big data e-gov projects across the world. http://projectfedena.org/pages/sampoorna . The same project is acclaimed by ruby on rails community and David Heinemeier Hansson - creator of Ruby on Rails. *Highlighted Features of Fedena 2.3* - Support for CCE(CBSE), CWA &am...

...ed the icpc variable myself). 3: Set up config.site as follows (mostly taken from the guide): CC=icc CFLAGS="-g -O3 -wd188 -ip" CPPFLAGS="-no-gcc" F77=ifort FLAGS="-g -O3" CXX=icpc CXXFLAGS="-g -O3" FC=ifort FCFLAGS="-g -O3 -mp" ICC_LIBS=/opt/intel/cce/10.1.015/lib/ IFC_LIBS=/opt/intel/fce/10.1.015/lib/ LDFLAGS="-L$ICC_LIBS -L$IFC_LIBS -L/usr/local/lib64" SHLIB_CXXLD=icpc SHLIB_LDFLAGS="-shared" #SHLIB_CXXLDFLAGS=-G -lCstd 4: ./configure --enable-R-shlib - first time it broke here since I had no flags set for SHLIB_LDFLAGS, s...

...9;, `USE_TZ')dnl FEATURE(`msp', `[127.0.0.1]')dnl secure01# ps -aux | grep sendmail smmsp 35809 0.0 0.4 2928 1912 ?? Is 3:51PM 0:00.00 sendmail: Queue runner@00:30:00 for /var/spool/clientmqueue (se root 35811 0.0 0.4 3052 1956 ?? Ss 3:51PM 0:00.09 sendmail: accepting connections (sendmail) any and all help appreciated!! Dave Heller epiadmin@epiphanet.com

I have a box behind a firewall that I'd like to administer. The firewall allows outgoing connections, but blocks all incoming connection requests. Thus, behind the firewall I can ssh out to my server, but I can't do the reverse. I found Sebastian Krahmer's OpenSSH Reverse [1] which looks very promising, but it is a few revisions behind. I was wondering if anyone has considered

Hi, Anybody knows when the new kernel package will be ready? regards,

I would like to build R and packages with the Intel 10.1 compilers in RHEL4. Using the flags below, I can successfully build R using a vanilla ./configure, but when I install new packages they build with gcc. My sysadmin suggested adding the flags to ./configure as illustrated below, but then the R build blows up with the config tail output that follows far below. It looks like gcc is still being searched fo...

...tely, I did not compile this version of R (it's on a large supercomputer system and this version of R was installed by the admins). Using "R CMD config", I see the following relevant settings: DYLIB_LD = icc -std=gnu99 DYLIB_LDFLAGS = -shared -openmp LDFLAGS = -L/opt/compilers/intel/cce/9.1.039/lib -L/opt/compilers/intel/fce/9.1.033/lib -L/usr/local/lib64 SHLIB_CXXLD = icpc SHLIB_CXXLDFLAGS = SHLIB_LD = icc -std=gnu99 SHLIB_LDFLAGS = -shared It looks like the SHLIB_CXXLDFLAGS is missing the "-shared -lR -L<loc-of-libR>". It's a mystery to me how R was built...

During the last two weeks there has been some discussion in freebsd-questions and freebsd-stable about the prospects of FreeBSD support for some motherboard devices associated with the Intel 865PE/875P and ICH5/ICH5R support chips now showing up in recent motherboard designs. The 865PE/875P chips are called MCH (memory controller hub) or "northbridge" chips. The ICH5/ICH5R chips are

Hi, i have a very huge number of data with the size 2375ko, i want to import them for R to xlsx but the size of excel is limited How can i resolve this problem? And please how can i define the frame Note that i have a table rows times c(1.....100) columns WLc(200...1000) and inside S c(15,.........) the table it is full values -- View this message in context:

...methods base loaded via a namespace (and not attached): [1] tools_3.1.3 Abbreviated versions of the output from R CMD INSTALL: For caTools: * installing to library ?/scratch3/BMC/co2/lib/R-3.1/x86_64-unknown-linux-gnu? * installing *source* package ?caTools? ... ** package ?caTools? successfully unpacked and MD5 sums checked ** libs icpc -I/apps/R/3.1.3-intel/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O3 -fp-model precise -c Gif2R.cpp -o Gif2R.o icpc -I/apps/R/3.1.3-intel/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O3 -fp-model precise -c GifTool...

flight 17612 linux-linus real [real] http://www.chiark.greenend.org.uk/~xensrcts/logs/17612/ Regressions :-( Tests which did not succeed and are blocking, including tests which could not be run: test-amd64-i386-pair 17 guest-migrate/src_host/dst_host fail REGR. vs. 12557 Regressions which are regarded as allowable (not blocking): test-amd64-i386-rhel6hvm-intel 9 guest-start.2 fail blocked in 12557 test-amd64-i386-q...

flight 17901 linux-linus real [real] http://www.chiark.greenend.org.uk/~xensrcts/logs/17901/ Regressions :-( Tests which did not succeed and are blocking, including tests which could not be run: test-amd64-i386-qemuu-rhel6hvm-intel 4 xen-install fail REGR. vs. 12557 test-amd64-i386-pv 4 xen-install fail REGR. vs. 12557 test-amd64-amd64-pv 4 xen-install fail REGR. vs. 12557...