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wnew
2012 Oct 18
1
WGCNA: Combining block-wise dendrograms and modules into a single figure
...s together
for the complete figure:
Input:
plotDendroAndColors(bwnet$dendrograms[[1:10]],
bwModuleColors[bwnet$blockGenes[[1:10]]],
"Module colors",
dendroLabels = FALSE, hang = 0.03,
addGuide = TRUE, guideHang = 0.05)
# Above, 'bwnew$dendrograms[[x]]' is equivalent to the parameter specified
by 'geneTree', but must be changed each time to plot blocks 1-10
# In addition, bwModuleColors[bwnet$blockGenes[[x]]] should be changed with
the parameters for the geneTree equivalent
Output:
"Error in bwnet$blockGenes[...