search for: broom

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2018 Mar 22
1
Cannot install broom package
...on of libgfortran to the specified version by downloading libgfortran-6.2.1-2.fc25.x86_64.rpm and manually installing it. However, I don't want to mess up my system, because the current version of libgfortran is replaced by it. Is there any other solution to my problem? Can I use e.g. "broom" (see below) without having to downgrade libgfortran? Thanks! Cheers Hans > install.packages("broom") Installing package into ?/home/hans/R/x86_64-redhat-linux-gnu-library/3.4? (as ?lib? is unspecified) versuche URL 'https://cran.rstudio.com/src/contrib/broom_0.4.3.tar.g...
2016 Jul 15
2
summary() dispatch puzzle
I'm sorry I haven't boiled this down to a more-minimal example yet, but ... I'm working on an S3 method (tidy.merMod, in the 'broom' package). It normally handles 'merMod' objects from the lme4 package, but I'm trying to make it handle 'merModLmerTest' objects from the lmerTest package too. The merModLmerTest class inherits (as an S4) class from the merMod class. The important difference (for my curr...
2019 Jun 17
1
Could generic functions check different S3 methods for an object when one of them produces an error?
...class vector?) is not the suitable one and it produces an error. Would there be some way to make the generic function to choice the correct method, or in case that for any method taken it produces an error, to try another one. For example (commented in detail here<https://github.com/tidymodels/broom/issues/714>): # object with multiple classes: the output of function `geepack::geeglm`. The output of `class(object)`: ``` [1] "geeglm" "gee" "glm" "lm" ``` The generic function: `stats::confint`. The S3 method chosen: `confint.glm`. It produces an...
2016 May 30
3
Codigo
Oliver gracias por le pista! Es un poco mas complicado, el código tiene varios pasos incluidos calculo de nuevas variables con los betas del glm y otras vueltas. Necesitaría una sentencia que tome cada lote haga los cálculos por separado y luego los une en el dataframe de salida El 30 de mayo de 2016, 10:02, Olivier Nuñez <onunez en unex.es> escribió: > Mira lapply .... > > Si L=
2016 Jul 18
0
summary() dispatch puzzle
>>>>> Ben Bolker <bbolker at gmail.com> >>>>> on Fri, 15 Jul 2016 16:45:50 -0400 writes: > I'm sorry I haven't boiled this down to a more-minimal example yet, > but ... > I'm working on an S3 method (tidy.merMod, in the 'broom' package). It > normally handles 'merMod' objects from the lme4 package, but I'm trying > to make it handle 'merModLmerTest' objects from the lmerTest package too. > The merModLmerTest class inherits (as an S4) class from the merMod > class. The...
2016 May 30
3
Codigo
...del tipo if() o repeat()), para obtener al final todos los lotes procesados. Saludos y gracias por tan rápida respuesta El 30 de mayo de 2016, 11:06, Carlos Ortega <cof en qualityexcellence.es> escribió: > Hola, > > Puedes utilizar el código de Oliver utilizando la librería "broom" que > permite obtener los parámetros (coeficientes) y características del modelo > (null.deviance, AIC, BIC) en un cómodo data.frame > > El código sería algo así como esto. > > library(broom) > L <- list(L1, L2..., L120) > > ajuste <- function(L) { >...
2019 Jun 18
0
Could generic functions check different S3 methods for an object when one of them produces an error?
Dear Iago, The R S3 object system works as expected here, using the first available method processing the class vector from left to right. The problem is that the broom package doesn't export the confint.geeglm() method but rather reserves it for internal use. I can't think why the package authors chose to do that but you could ask them. The following therefore works (following on with your example): > confint.geeglm <- broom:::confint.geeglm > c...
2017 Dec 25
2
LSD-test
The model should be class aov or lm and my model class is aovlist. tried tidy from broom library but did not work. To make it class aov, I had to remove the error term; model <- aov(Rotationdata_R$`GY(Mg/ha)`~Rep+code*as.factor(Nitrogen),data=Rotationdata_R) Ahmed Attia, Ph.D. Agronomist & Soil Scientist On Mon, Dec 25, 2017 at 7:38 PM, David Winsemius <dwinsemius at c...
2017 Jul 05
2
Svyglm Error
...svyglm(formula=F3ATTAINB~F1PARED,family="quasibinomial",design=subset(elsq1ch_brr,BYSCTRL==1&G10COHRT==1&F1RTRCC=="Other"),na.action=na.omit) summary(Othpared)? Any help in resolving this concern would be greatly appreciated. Sincerely, Courtney Courtney Benjamin Broome-Tioga BOCES Automotive Technology II Teacher Located at Gault Toyota Doctoral Candidate-Educational Theory & Practice State University of New York at Binghamton cbenjami at btboces.org<mailto:cbenjami at btboces.org> 607-763-8633 [[alternative HTML version deleted]]
2018 May 01
2
How would I color points conditional on their value in a plot of a time series
...rks OK with a simple, non-time-series scatterplot, as in sss <- data.frame(x = rpois(12, lambda = 8), y = rnorm(12, mean = 100, sd = 25)) with(sss, plot(y ~ x, col = ifelse(y > 100, "black", "red"))) ## but I am missing something about time series. Thanks. --Chris Ryan Broome County Health Department and Binghamton University Binghamton, NY [[alternative HTML version deleted]]
2011 Mar 22
2
adding vertical segments to an xyplot in lattice
I have a dataframe that looks like this: > str(chr) 'data.frame': 84 obs. of 7 variables: $ county: Factor w/ 3 levels "Broome","Nassau",..: 3 3 3 3 3 3 3 3 3 3 ... $ item : Factor w/ 28 levels "Access to healthy foods",..: 21 19 20 18 16 3 2 6 17 8 ... $ value : num 8644 15 3.5 3.9 7.7 ... $ low : num 7897 9 2.5 2.6 7 ... $ high : num 9390 22 4.5 5.2 8.4 37 30 23 24 101 ... $ target:...
2020 Sep 01
3
Cálculo - intervalo de confianza - modelo nls - predict
Buenas tardes, Quisiera obtener el intervalo de confianza (y también intervalos de predicción) para los valores predichos en un modelo nls. ¿Hay alguna manera que no sea por ggplot2 (me interesaría obtener el valor listado -además de en el gráfico-) o por bootstrap? Os copio el código del ajuste del modelo y predicción para los 3 días siguientes: *#Ajuste del modelo* model = nls(formula =
2017 Jul 05
0
Svyglm Error
...; ,design=subset(elsq1ch_brr,BYSCTRL==1&G10COHRT==1& > F1RTRCC=="Other"),na.action=na.omit) > summary(Othpared)? > > > Any help in resolving this concern would be greatly appreciated. > > Sincerely, > > Courtney > > > Courtney Benjamin > > Broome-Tioga BOCES > > Automotive Technology II Teacher > > Located at Gault Toyota > > Doctoral Candidate-Educational Theory & Practice > > State University of New York at Binghamton > > cbenjami at btboces.org<mailto:cbenjami at btboces.org> > > 607-763-863...
2017 Aug 17
2
How to install Tidyverse on Ubuntu 17.04? Getting gcc errors for -fstack-protector-strong and -Wdate-time
...uot;) Installing package into ?/home/popx/R/x86_64-pc-linux-gnu-library/3.4? (as ?lib? is unspecified) also installing the dependencies ?colorspace?, ?munsell?, ?plyr?, ?psych?, ?reshape2?, ?bindrcpp?, ?Rcpp?, ?digest?, ?scales?, ?curl?, ?openssl?, ?cellranger?, ?stringi?, ?selectr?, ?tidyselect?, ?broom?, ?dplyr?, ?forcats?, ?ggplot2?, ?haven?, ?httr?, ?jsonlite?, ?lubridate?, ?modelr?, ?purrr?, ?readr?, ?readxl?, ?stringr?, ?tibble?, ?rvest?, ?tidyr?, ?xml2? trying URL 'https://cran.rstudio.com/src/contrib/colorspace_1.3-2.tar.gz' Content type 'application/x-gzip' length 293433 b...
2017 Dec 25
0
LSD-test
> On Dec 25, 2017, at 2:09 PM, Ahmed Attia <ahmedatia80 at gmail.com> wrote: > > The model should be class aov or lm and my model class is aovlist. > tried tidy from broom library but did not work. To make it class aov, > I had to remove the error term; > > model <- aov(Rotationdata_R$`GY(Mg/ha)`~Rep+code*as.factor(Nitrogen),data=Rotationdata_R) You seemed to have missed my point that LSD.test is not in the packages loaded by default. > Ahmed Attia...
2018 May 01
2
How would I color points conditional on their value in a plot of a time series
...s(12, lambda = 8), y = rnorm(12, mean = 100, sd >> = >> 25)) >> with(sss, plot(y ~ x, col = ifelse(y > 100, "black", "red"))) >> >> ## but I am missing something about time series. >> >> Thanks. >> >> --Chris Ryan >> Broome County Health Department >> and Binghamton University >> Binghamton, NY >> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >>...
2017 Mar 06
1
Please add me to bugzilla
...a common problem, and b) there will be bigger dendrograms (up to at least 25000 leaves). Please see attached patch for non-recursive implementations. Regards, Bradley On Mon, Mar 6, 2017 at 3:50 AM, Martin Maechler <maechler at stat.math.ethz.ch> wrote: > >>>>> Bradley Broom <bmbroom at gmail.com> > >>>>> on Sun, 5 Mar 2017 16:03:30 -0600 writes: > > > Please add me to R bugzilla. Thanks, Bradley > > Well, I will not do it just like that (mean "after such a > minimal message"). > > I don't see any e...
2018 May 01
0
How would I color points conditional on their value in a plot of a time series
...as in > > sss <- data.frame(x = rpois(12, lambda = 8), y = rnorm(12, mean = 100, sd = > 25)) > with(sss, plot(y ~ x, col = ifelse(y > 100, "black", "red"))) > > ## but I am missing something about time series. > > Thanks. > > --Chris Ryan > Broome County Health Department > and Binghamton University > Binghamton, NY > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/li...
2018 Mar 05
1
model.frame strips class as promised, but fails to strip OBJECT in C
Full thread here: https://github.com/tidyverse/broom/issues/287 Reproducible example: is.object(freeny$y) # [1] TRUE attr(freeny$y, 'class') # [1] "ts" class(freeny$y) # [1] "ts" # ts attribute wiped by model.frame class(model.frame(y ~ ., data = freeny)$y) # [1] "numeric" attr(model.frame(y ~ ., data = freeny...
2017 Mar 05
2
Please add me to bugzilla
Please add me to R bugzilla. Thanks, Bradley [[alternative HTML version deleted]]