search for: breiwick

...dependencies in R code ... WARNING 'library' or 'require' calls not declared from: RODBC See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. Does anyone know where I have gone astray? Thank you. Jeff Breiwick

Hello, I am running a simple nls model (which a friend ran OK) but I get the following error: Error in nls(y ~ R * (1 - (x/K)^2), data = nls.dat, start = list(R = 0.3, : object 'R_nls_iter' not found Does anyone know what the 'R_nls_iter' error is? The data are: x=1:8 ; y=c(14,19,25,34,43,56,69,76) # starting values: R=.3, K=94 Thanks in advance. Jeff

Dear R-Group, I have a function that sorts a data frame and oneo of the lines in the function is: vars <- unlist(strsplit(formc, "[\\+\\-]")) The function works fine and the above line is always reached. However, when I include the function in a package and run "R CMD check pkgname" it gives this error message: '\+' is an unrecognized escape in character

...2 different formulas, say F1 and F2, which consist of about 10 factors (Y~A+B+C+...) but one has an interaction term (A:B) while the other doesn't. But when I perform F1==F2 it comes back as TRUE. Is there a proper way to compare formulas? ------------------------------------------- Jeffrey M Breiwick, Ph.D. National Marine Mammal Lab., AFSC, NOAA 7600 Sand Point Way NE, Bldg. 4 Seattle, Washington 98115 USA

Hi, I have a contour plot and I want to shade a polygon (the area below a line) but the polygon shading wipes out the contour lines. Does anybody know how to shade the polygon and still see the contour lines? Thanks. Jeff

...- shQuote("CMD INSTALL -l D:/R/JMB.LIBS jmb.test") system(paste('"R"',commands)) Can anyone tell me where I have gone astray? I suspect the problem lies in quoting the strings. The command (R CMD INSTALL etc.) runs OK if I run it in a windows shell. Thank you. Jeff Breiwick

...as 8 groups, the 2nd has 7 and the third has 6. But I the groups to line up: 1 2 3 4 5 6 7 8 2 3 4 5 6 7 8 3 4 5 6 7 8 where the numbers actually refer to years. I suspect I have to manipulate the function bxp(). Is there a relatively simple way to do this? Thanks for any help. Jeff Breiwick NMFS, Seattle

...as the following line which causes a warning: attach(what="c:/r/jmb/.RData", pos=3) I get the following message after .First() is loaded: During startup - Warning message: use of NULL environment is deprecated Is there a simple fix that will eliminate this warning message? Thanks. J. Breiwick

...group of functions? I know the DESCRIPTION file is different under R 2.0.0 but what else do I have to consider? I've read most of the pertinent documentation and though it is somewhat helpful it is not always helpful if you haven't been able to get these procedures to run correctly. Jeff Breiwick National Marine Mammal Laboratory Natl. Marine Fish. Serv. 7600 Sand Point Way NE, Bldg 4 Seattle, WA 98115 USA ______________________________________________ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project....

Hello, I have a beginner's Q: if i want to know all the functions provided by a package, what is command for that? in another word, Is there a command to list all the commands available in a packege? thanks a lot, yan

Hi, I have been using R under Windows but have started to use R (ver. 2.3.0,) under Linux (linux-gnu). I have been saving my workspace and I notice that I sometimes end up with 2 version of the .RData file: .RData and .Rdata. Can someone explain what is happening? I am not sure which one is loaded so I have ended up losing data by deleting the wrong file. I think the saved file should be

Hi, and thanks for your help in order to do collinearity analysis I downloaded the perturb package. I run a lm (regression) and on that the ??calldiag?? commad to get condition numbers but i get the following message: the variable XY with modus ??numeric?? was not found (it does the same with all predictors despite all variables are numeric and exists). Can anyone tell me how can I go arround

Hello, I have a multi-year dataset (see below) with date, a data value and a flag for the data value. I want to find the monthly median for each month in this dataset and then plot it. If anyone has suggestions they would be greatly apperciated. It should be noted that there are some dates with no values and they should be removed. Thanks Emily > print ( str(data$flow$daily) )