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...on tool. Please see http://www.math.usu.edu/~adele/forests/ for more detailed information, as well as the Fortran code. Comments/questions/bugs reports/patches much appreciated! A few notes about the new version: o There is a new tuneRF() function for searching for the optimal mtry, following Breiman's suggestion. PLEASE use it to see if result can be improved! o A new variable importance measure replaces the one based on margin. This new measure is the same as in Breiman's V5. The analogous measure is also implemented for regression. This new measure is designed to be more robust...

...on tool. Please see http://www.math.usu.edu/~adele/forests/ for more detailed information, as well as the Fortran code. Comments/questions/bugs reports/patches much appreciated! A few notes about the new version: o There is a new tuneRF() function for searching for the optimal mtry, following Breiman's suggestion. PLEASE use it to see if result can be improved! o A new variable importance measure replaces the one based on margin. This new measure is the same as in Breiman's V5. The analogous measure is also implemented for regression. This new measure is designed to be more robust...

We are organizing three projects to honor Leo Breiman this year. First, Salford Systems' Data Mining Conference will open with a special session devoted to his scientific contributions. Second, we would like to construct Leo's scientific "family tree," identifying Leo's students, collaborators, and others whose work has bee...

Hi all, There is now a package available on CRAN that provides an R interface to Leo Breiman's random forest classifier. Basically, random forest does the following: 1. Select ntree, the number of trees to grow, and mtry, a number no larger than number of variables. 2. For i = 1 to ntree: 3. Draw a bootstrap sample from the data. Call those not in the bootstrap sample the "o...

Hi all, There is now a package available on CRAN that provides an R interface to Leo Breiman's random forest classifier. Basically, random forest does the following: 1. Select ntree, the number of trees to grow, and mtry, a number no larger than number of variables. 2. For i = 1 to ntree: 3. Draw a bootstrap sample from the data. Call those not in the bootstrap sample the "o...

...mate this probability (with type=”prob”). If I understand correctly, this function returns the proportion of trees in the random forest voting in favour of the success or failure of the relocation. In the appendix of the paper cited as reference on the help page of the function randomForest() (Breiman, 2001. Random Forest), Breiman notes that these proportions of votes can be interpreted as the probability, calculated over all trees, that a tree, given the variables x and the training set, would classify correctly a relocation as success/failure (using Breiman's notations, P_\Theta( h(\T...

A few days ago I asked whether there were options other than na.action=na.fail for the R port of Breiman?s randomForest; the function?s help page did not say anything about other options. I have since discovered that a pdf document called ?The randomForest Package? and made available by Andy Liaw (who made the tool available in R---thank you) does discuss an option. It is an implementation of Brei...

Apologies for cross posting.... --------------------------------------------------------------------- CART Data Mining'04: First International CART(R) Conferences Focusing on the Data Mining technology of Leo Breiman, Jerome Friedman, Richard Olshen, Charles Stone (CART, MARS(R), TreeNet(tm), PRIM(tm)...) First Call For submissions --------------------------------------------------------------------- US Venue: San Francisco, March 23-25, 2004 EU Venue: Madrid, M...

Hi, In R, how to do missing value replacement for test data in randome forest in the way Breiman decribed. thanks in advance iris

Hi, I had two questions regarding random forests for regression. 1) I have read the original paper by Breiman as well as a paper dicussing an application of random forests and it appears that the one of the nice features of this technique is good predictive ability. However I have some data with which I have generated a linear model using lm(). I can get an RMS error of 0.43 and an R^2 of 0.62. However w...

...quot; on your registration form. Homepage: http://www.cartdatamining.com Detailed Conference Schedule: http://www.cartdatamining.com/program.htm Registration (San Francisco): http://www.cartdatamining.com/RegCART04.pdf ** OPENING SESSION, Monday March 22nd, 7:30 PM Personal recollections of Leo Breiman, Jerome Friedman, Richard Olshen, Charles Stone. Join us to hear Breiman, Friedman, Olshen and Stone discuss their early research interests and trace the ideas, decisions, and chance events that culminated in CART, their landmark work. ** Join us for John Elder's popular presentation: "To...

Hi, I'm looking to perform a classification analysis on an imbalanced data set using random Forest and I'd like to reproduce the weighted random forest analysis proposed in the Chen, Liaw & Breiman paper "Using Random Forest to Learn Imbalanced Data"; can I use the R package randomForest to perform such analysis? What is the easiest way to accomplish this task? Thanks, Paolo Sonego

...ive user's guide for randomForest including the benefits on using it with MDS. Can anybody suggest a general guide? I've been finding a lot of broken links and cs-type of web pages rather than an end-user's guide. Also people's experience on adjusting the mtry param would be useful. Breiman says that it isn't too sensitive but I'm curious if anybody has had a different experience with it. Thanks in advance and apologies if this is too general. Concerned about your privacy? Follow this link to get FREE encrypted email: https://www.hushmail.com/?l=2 Big $$$ to be made with...

...ww.cartdatamining.com/RegCART04.pdf Other deadlines: Paper Submission: January 12th Student Contest: January 10th --------------------------------------------------------------------- CART Data Mining'04: First International CART(R) Conferences Focusing on the Data Mining technology of Leo Breiman, Jerome Friedman, Richard Olshen, Charles Stone (CART, MARS(R), TreeNet(tm), PRIM(tm)...) --------------------------------------------------------------------- US Venue: San Francisco, March 22-24, 2004 EU Venue: Madrid, May 11-12, 2004 Conference home page: http://www.cartdata...

Hello. I have a hudge problem, don't know how to deal with it... I'm supposed to implement a tree structure in R, without using rpart library... I don't have any clue about appropriate approach... Anyway, I can't use pointers under R...so how to to it? lists, vectors... Anyway, does anybody knows how the regression tree in rpart was implemented... Someone please help! Thanks, ana

...itched to Calloc/Free. Electric Fence did not find any problem. o Put assert(index < bound); assert(index >=0); everywhere in the C routine where arrays are accessed. Everything ran fine. (I did not (don't really know easy way to) do the same thing for the Fortran subroutines (mostly Breiman's original code) called by the C function. o Changed to malloc()/free(). Still didn't find anything with Electric Fence. Can some one suggest how to proceed? Is it still not save to assume the bug is gone? Regards, Andy > -----Original Message----- > From: Liaw, Andy [mailto:and...

...ogate splits and/or delta impurity for decision trees at each node? Long Version: I have local, legacy code which I use to calculate my decision trees. I would like to switch to R, but as I understand it surrogate splits are not implemented. Surrogate splits and feature ranking are described in Breiman et al "CART" 1984. Curiously, they don't seem to appear anywhere else in the literature. Can anyone comment on how extenible Ripley's tree package is? Thanks in advance, --Clayton -- Clayton Springer, Ph. D. Sandia National Laboratories csprin at ca.sa...

A new version of the randomForest package is now available on CRAN. The DESCRIPTION is: Package: randomForest Title: Breiman's random forest for classification and regression Version: 3.4-1 Depends: R (>= 1.5.0) Author: Fortran original by Leo Breiman and Adele Cutler, R port by Andy Liaw and Matthew Wiener. Description: Classification and regression based on a forest of trees using random inputs. Maintainer: Andy...

...ction with a personalized splitfunction... but I'm not able to do it! More precisely, I would like to know what is the meaning of the function 'init', 'split' and 'eval' named in the help page.I can't find any answer in 'Classification and regression trees' (Breiman, ...) , in 'Modern applied statistics with S-plus' (Venables, Ripley) or even in the on-line forum.Thank You very much Simone Vantini

For those of you who have not heard: Prof. Breiman passed away on July 5th. http://www.berkeley.edu/news/media/releases/2005/07/07_breiman.shtml Andy