search for: bqtl

...looking at rw1020\bin\INSTALL, I noticed $pkg =~ s/\/$//; which I assume is to strip the trailing slash from a package name before obtaining the package name and cleaning out its directory I added $pkg =~ s/\\$//; immediately after this line. Rerunning Rcmd INSTALL C:\rw1011\src\library\bqtl\ with that change seemed to work OK The session follows further below. ---------------------------------------- More details: Using cmdproxy.exe under emacs shell-mode under Win98, It seems that the problem arose when I used Rcmd INSTALL C:\rw1011\src\library\bqtl\ A subsequent Rcmd INS...

Package bqtl version 1.0 is now available on CRAN. Description: QTL mapping toolkit for inbred crosses and recombinant inbred lines. Includes maximum likelihood and Bayesian tools. I am keen to have comments about this package including implementation details, additional functionality, and (of course) proble...

...ents (Text) Reference Manual (PDF) Package Sources AnalyzeFMRI CoCoAn Devore5 EMV GLMMGibbs GenKern GeneSOM KernSmooth Matrix NISTnls Oarray PHYLOGR PTAk RArcInfo RMySQL RODBC RPgSQL RandomFields RmSQL Rstreams Rwave SASmixed SuppDists VR XML acepack adapt akima ash bindata blighty boot bootstrap bqtl car cclust cfa chron cluster cmprsk coda conf.design cramer date diamonds dse e1071 ellipse event.chart exactRankTests fastICA fdim fields foreign fracdiff gafit gee geoR gld gregmisc gss ineq leaps lgtdl lmtest locfit logspline lokern lpridge maptree maxstat mclust mda meanscore mgcv mlbench muhaz...

Hello to everyone! I have built CRAN task view for genetics. For now I have not submit it to CRAN yet and it can be accessible from: http://www.bfro.uni-lj.si/MR/ggorjan/software/R/Genetics.html http://www.bfro.uni-lj.si/MR/ggorjan/software/R/Genetics.ctv I have not submitted it to CRAN, since I would like first some opinion about it. Genetics is really so broad field that I belive one person

...ut encounters one? Chuck Berry --please do not edit the information below-- Version: platform = sparc-sun-solaris2.7 arch = sparc os = solaris2.7 system = sparc, solaris2.7 status = major = 1 minor = 1.0 year = 2000 month = June day = 15 language = R Search Path: .GlobalEnv, package:bqtl, Autoloads, package:base > -- Charles C. Berry (858) 534-2098 Dept of Family/Preventive Medicine E mailto:cberry@tajo.ucsd.edu UC San Diego http://hacuna.ucsd.edu/members/ccb.html La Jolla, San Diego 92093-0645 -.-.-....

...ms to be 1.1-10. Cheers, Andy > update.packages() trying URL `http://cran.us.r-project.org//bin/windows/contrib/PACKAGES' Content type `text/plain' length 6560 bytes opened URL downloaded 6560 bytes boot : Version 1.2-7 in C:/R/rw1050/library Version 1.2-8 on CRAN Update (y/N)? n bqtl : Version 1.0-4 in C:/R/rw1050/library Version 1.0-5 on CRAN Update (y/N)? n chron : Version 2.2-20 in C:/R/rw1050/library Version 2.2-21 on CRAN Update (y/N)? n emplik : Version 0.4 in C:/R/rw1050/library Version 0.5-1 on CRAN Update (y/N)? n foreign : Version 0.5-2 in C:/R/rw1050/librar...

...lm","bim","bindata","Biodem","biopara","bitops","bivpois","blighty","blockrand","BMA","boa","Bolstad","boolean","boost","boot","bootstrap","bqtl","BradleyTerry","brlr","BRugs","BSDA","BsMD","butler","calibrate","calibrator","caMassClass","car","cat","caTools","catspec","cba","cclust",&quo...

Hi all, I've compiled R-1.4.0 on my NT box with link against ATLAS. It has passed all the Rcmd CHECK that I could run. If there's sufficient interest, I can make the SetupR.exe available (on CRAN?). Just drop me a note if you're interested. Note the following: o I can only connect thru 56K dial-up until Jan. 2, 2002, so unless there's overwhelming demand, I won't attempt

CRAN (and crantastic) updates this week New packages ------------ * bdoc (1.0) Michael Anderson http://crantastic.org/packages/bdoc This package contains a function that will classify DNA barcodes as well as a few test and reference data sets. * bdsmatrix (1.0) Terry Therneau http://crantastic.org/packages/bdsmatrix This is a special case of sparse matrices, used by coxme and

.... waffect is used to assess empirically the statistical power of Genome Wide Association studies. Updated packages ---------------- adaptivetau (1.0), adehabitat (1.8.10), adehabitatLT (0.3.5), aod (1.3), asypow (2012.04-1), BayesDA (2012.04-1), bayesTFR (1.5-1), Bergm (2.3), BoolNet (1.50), bqtl (1.0-27), cccrm (1.1), censReg (0.5-10), cherry (0.2-6), coefplot (1.1.7), coloc (1.08), CompRandFld (1.0.2), ConjointChecks (0.0.7), copula (0.99-1), crawl (1.3-4), deseasonalize (1.03), digeR (1.3), DistributionUtils (0.5-1), effects (2.1-1), elec.strat (0.1.1), ElemStatLearn (2012.04-0), EVER (1...

CRAN (and crantastic) updates this week New packages ------------ * allan (1.0) Alan Lee http://crantastic.org/packages/allan Automates Large Linear Analysis Model Fitting * andrews (1.0) Jaroslav Myslivec http://crantastic.org/packages/andrews Andrews curves for visualization of multidimensional data * anesrake (0.3) Josh Pasek http://crantastic.org/packages/anesrake This