search for: bottlleneck

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2012 Dec 05
1
Understanding svd usage and its necessity in generalized inverse calculation
...4.50 2.67 8.92 1.64 "mode" 14.44 2.66 1.76 0.32 "doTryCatch" 13.94 2.56 2.72 0.50 ".deparseOpts" 12.42 2.28 7.92 1.46 I *Think* this means that a bottlleneck here is svd, which is being called by this function that calculates generalized inverses: ## Moore-Penrose Inverse function (aka Generalized Inverse) ## X: symmetric matrix ## tol: convergence requirement mpinv <- function(X, tol = sqrt(.Machine$double.eps)) { s <- svd(X) e <-...