search for: bolstad

Ben Bolstad experienced something odd while running R CMD check over a package of ours using r-devel (yesterday's fresh). He tracked down the problem to a vignette calling 'library(MASS)'. Please kindly ignore if this is a known (and temporary) issue. Laurent ----- Forwarded message from B...

...object "MouseArray" not found We were hoping to use the MouseArray data with some of the sma functions. Since the data seems the only problem, is the data available elsewhere in this form? Or is there an easy work-around? I have tried contacting the listed maintainer (Benjamin Bolstad), but the listed email address (mb at bmbolstad.com) bounced. Thanks. P. > sessionInfo() R version 2.5.0 (2007-04-23) i486-pc-linux-gnu locale: LC_CTYPE=en_AU.UTF-8;LC_NUMERIC=C;LC_TIME=en_AU.UTF-8;LC_COLLATE=en_AU.UTF-8;LC_MONETARY=en_AU.UTF-8;LC_MESSAGES=en_AU.UTF-8;LC_PAPER=en_AU.UTF-8;L...

...bsp; The error I would get after fitting the limited number of voxels is:  "Error in approx(x, fx, n = 2 * n.pts + 1) :         need at least two non-NA values to interpolate" I think the error is from the library Bolstad since I'm using the sintegral function as part of the fitting equation.  I've tried numerous nonlinear functions including: nlm, optim and nlminb, but all stop after performing the fit on a limited number of voxels.  I took the values for which the fitting routine stops an...

...vileges to use it in the "regular" way.. When I try to compile it everything is ok untill: checking for libogg... ok checking for libvorbis... ok checking for struct ovectl_ratemanage_arg... no configure: error: must have Ogg Vorbis v1.0 or above installed best regard, Sverre Helge Bolstad -------------- next part -------------- An HTML attachment was scrubbed... URL: http://lists.xiph.org/pipermail/icecast/attachments/20050215/3c6c7d57/attachment.html

...ment the tool's usage, and are provided in the "doc" subdirectory of each package library. Try: library(tkWidgets) vExplorer() for assistance after installing BioConductor. WHO: ==== For the Bioconductor development team: Douglas Bates, University of Wisconsin, USA. Ben Bolstad, Division of Biostatistics, UC Berkeley, USA. Vince Carey, Harvard Medical School, USA. Marcel Dettling, Federal Inst. Technology, Switzerland. Sandrine Dudoit, Division of Biostatistics, UC Berkeley, USA. Byron Ellis, Harvard Department of Statistics, USA. Laurent Gautier, Technial University of D...

I am trying to upload into R 143 Affymetrix chips onto using R on the NIH Nimbus server. I can load 10 chips without a problem, however, when I try to load 143 I receive a error message: cannot create a vector of 523263 KB. I have expanded the memory of R as follows: R --min-vsize=10M --max-vsize=2500M --min-nsize=10M -max-nsize=50M (as specified in help in R). After running this command the

Hi, I am dealing with the following problem. There are two biochemical assays, say A and B, available for analyzing blood samples. Half the samples have been analyzed with A. Now, for some insurmountable logistic reasons, we have to use B to analyze the remaining samples. However, we can do a comparative study on a small number of samples where we can obtain concentrations using both A and

...lidate","betareg","Bhat","BHH2","bicreduc","biglm","bim","bindata","Biodem","biopara","bitops","bivpois","blighty","blockrand","BMA","boa","Bolstad","boolean","boost","boot","bootstrap","bqtl","BradleyTerry","brlr","BRugs","BSDA","BsMD","butler","calibrate","calibrator","caMassClass","car",&...

...ated example of the package's use) as well as possibly some "HOWTO"s. These document the tool's usage, and are provided in the "doc" subdirectory of each package library. -- WHO: For the Bioconductor development team: Douglas Bates, University of Wisconsin, USA. Ben Bolstad, Division of Biostatistics, UC Berkeley, USA. Vince Carey, Harvard Medical School, USA. Marcel Dettling, Federal Inst. Technology, Switzerland. Sandrine Dudoit, Division of Biostatistics, UC Berkeley, USA. Byron Ellis, Harvard Department of Statistics, USA. Laurent Gautier, Technial University of D...

...ated example of the package's use) as well as possibly some "HOWTO"s. These document the tool's usage, and are provided in the "doc" subdirectory of each package library. -- WHO: For the Bioconductor development team: Douglas Bates, University of Wisconsin, USA. Ben Bolstad, Division of Biostatistics, UC Berkeley, USA. Vince Carey, Harvard Medical School, USA. Marcel Dettling, Federal Inst. Technology, Switzerland. Sandrine Dudoit, Division of Biostatistics, UC Berkeley, USA. Byron Ellis, Harvard Department of Statistics, USA. Laurent Gautier, Technial University of D...

Hello, I want to know if there are some functions or packages to solve differential and integral equation using R. Thanks. Shao chunxuan. [[alternative HTML version deleted]]

CRAN (and crantastic) updates this week New packages ------------ * apcluster (1.0.1) Ulrich Bodenhofer http://crantastic.org/packages/apcluster The apcluster package implements Frey's and Dueck's Affinity Propagation clustering in R. The algorithms are analogous to the Matlab code published by Frey and Dueck. * BioPhysConnectoR (1.6-1) Franziska Hoffgaard

CRAN (and crantastic) updates this week New packages ------------ * allan (1.0) Alan Lee http://crantastic.org/packages/allan Automates Large Linear Analysis Model Fitting * andrews (1.0) Jaroslav Myslivec http://crantastic.org/packages/andrews Andrews curves for visualization of multidimensional data * anesrake (0.3) Josh Pasek http://crantastic.org/packages/anesrake This

Hi, I'm trying to solve the following system of nonlinear equations P1 - F2 = x[1] + (1/2) * x[3] * x[1]^2 P2 - F2 = x[2] + (1/2) * x [3] * x[2]^2 F1 - F2 = -(1/2) * x[1] - (1/2) * x[2] + (1/8) * x [3] * (x[1] + x[2])^2 B1 - F2 = (1/4) * x[1] - (1/4) * x[2] + (1/16) * x[3] * (x[1] - x[2])^2 B2 - F2 = (1/4) * x[1] + (1/4) * x[2] + (1/16) * x[3] * (x[1]