search for: bm2

Displaying 20 results from an estimated 26 matches for "bm2".

Did you mean: b2
2011 Mar 01
1
Problem on flexmix when trying to apply signature developed in one model to a new sample
...cbind(Data$var1,Data$var2) I see that the best model has 2 groups and use: ex2 <- flexmix(BM~1, k=2, model=FLXMCmvnorm(diagonal=FALSE)) print(ex2) plotEll(ex2, BM) Then I want to test to which group one subset of patients belongs, so I import a smaller sample of the previous data: BM2<-data.frame (Data2$var1,Data2$var2) However when I test the results I get are from the complete training sample I used in ex2 and not from the new sample BM2. ProbMCI<-posterior(ex2, BM2) And if I do the following I get double the number of entered cases (I think because I entered...
2007 May 29
0
Fw: [RFC] makedumpfile: xen extraction
...for (i = 0; i < info->num_domain; i++) { + if (info->domain_list[i].domain_id == 0 && + info->domain_list[i].pickled_id == id) + return TRUE; + } + + return FALSE; +} + +int +create_dump_bitmap_xen(struct DumpInfo *info) +{ + unsigned int remain_size; + struct cache_data bm2; + unsigned long page_info_addr; + unsigned long pfn; + unsigned int count_info; + unsigned int _domain; + int i; + struct pt_load_segment *pls; + int ret = FALSE; + + /* note: the first half of bitmap is not used for Xen extraction */ + bm2.fd = info->fd_bitmap; + bm2.file_name = info-...
2010 Apr 03
2
Using ifelse and grep
...uot; "down" "down" "down" "down" "down" "down" "down" "down" [11] "down" "down" Thanks in advance. Sam Sample Transmission section BU1 0.39353 up BU2 0.38778 up BU3 0.42645 up BM1 0.37510 mid BM2 0.5103 mid BM3 0.67224 mid BD1 0.37482 down BD2 0.54716 down BD3 0.50866 down BU1 0.34869 up BU2 0.32831 up BU3 0.59877 up BM1 0.52518 mid BM2 0.94387 mid BM3 0.94387 mid BD1 0.46872 down BD2 0.63115 down BD3 0.45239 down n" "down" "down" "down" &quot...
2010 Aug 28
1
star models
Hi, I am traying to implement an STAR model, but I have some problems. I am following the instruction of the model, that they are in: http://bm2.genes.nig.ac.jp/RGM2/R_current/library/tsDyn/man/star.html that they are from: http://bm2.genes.nig.ac.jp/RGM2/pkg.php?p=tsDyn The model is: star(x, m=2, noRegimes, d = 1, steps = d, series, rob = FALSE, mTh, thDelay, thVar, sig=0.05, trace=TRUE, control=list(), ...) I have implemented the...
2010 Apr 14
2
GAMM : how to use a smoother for some levels of a variable, and a linear effect for other levels?
...on "Mixed Effects Models and Extensions in Ecology with R" by Zuur et al. In Section 6.2, an example is discussed where a gamm-model is fitted, with a smoother for time, which differs for each value of ID (4 different bird species). In earlier versions of R, the following code was used BM2<-gamm(Birds~Rain+ID+ s(Time,by=as.numeric(ID=="Stilt.Oahu"))+ s(Time,by=as.numeric(ID=="Stilt.Maui"))+ s(Time,by=as.numeric(ID=="Coot.Oahu"))+ s(Time,by=as.numeric(ID=="Coot.Maui")), correlation=corAR1(form=~Time |ID ),...
2007 Oct 10
0
detecting finite mixtures
...nt types of distributions, multiple subjects (20, say) respond to many items of each type (100 each, say). Each subject generates two distributions, A vs. B. I run the EM algorithm to find the means for the two subdistributions in each. The algorithm finds two means for both, say Am1, Am2, Bm1, Bm2. Since the algorithm is told to find two distributions, even if there's really only one (as hypothesized for B), it seems wrong to test H0: Am1 = Am2 vs. H0: Bm1 = Bm2 - I'd expect both to be rejected. Rather, I want to test H0: Am1 = Bm1 (should differ) vs. H0: Am2 = Bm2 (should be the...
2009 Dec 05
1
Forest Plot
...a similar "Forest Plot" as it is on the following link, but my data would be having only two columns (one for "Estimate" and other for "Std. Dev"). Can anyone suggest some function() {Package} which can take such file as an input and give following forest plot: http://bm2.genes.nig.ac.jp/RGM2/R_current/library/metafor/man/images/big_plot.rma.uni_001.png Thanks, Xin [[alternative HTML version deleted]]
2009 Mar 18
2
Three Parameter FRECHET Distribution
Dear R Helpers Which package is available for estimatine the parameters of three parameter FRECHET distribution. Also, how to generate the random numbers for Frechet using these three estimated parameters. Thanking in advance Maithili
2008 Sep 15
4
How to draw a plot like this?
Hi there, I hope to draw a plot like this: http://www.sg-chem.net/swizard/Ru-bqdi-spectra.gif is it possible to draw it using R? thanks for any suggestions. regards, Jinsong
2008 Dec 19
4
Akaike weight in R
...t; Wondering how can I generate "Akaike weight" with R? I know the description, > but is there any function to generate by R on the web-site or R library? > I am using GLM or GLMM (family=binomial), so would be appreciated if you > help me. You could have a look at this. http://bm2.genes.nig.ac.jp/RGM2/R_current/library/aod/man/summary.aic.html Which is in the OAD package Graham
2009 Jul 09
9
Population pyramids
Hi, I hope somebody can help me with this issue: I am doing population pyramids using the barplot command, so in the left side I have male age structure and in the right side the female age structure. To plot the male age structure I put the data in negative numbers. Now, I want to change the sign in the bar plot in such way that I have no-sign numbers, both in left and right side of the graph. I
2011 Apr 30
1
dovecot Digest, Vol 96, Issue 61
...e sent emails to the IMAP > server's sent mail folder. Outlook 2007+ no longer requires you to create that rule, you can now just tell it which IMAP folder to save the Sent mail to: http://office.microsoft.com/en-us/outlook-help/change-where-sent-e-mail-mess ages-are-saved-HA010164216.aspx#BM2 -- Best regards, Charles ------------------------------ _______________________________________________ dovecot mailing list dovecot at dovecot.org http://dovecot.org/cgi-bin/mailman/listinfo/dovecot End of dovecot Digest, Vol 96, Issue 61 ***************************************
2008 Oct 14
1
Advice on Computer Specifications
Hello I'm running into a variety of limitations with my computer complaining that it doesn't have sufficient memory. It is a Dell Latitude D630 Duo Core CPU T7700 @ 2.40 GHz, with 3.50 GB RAM. I'm working with relatively large dataframes > dim(AllYears) returns 4071840 records with 13variables sometimes this complains that it can not allocate vectors of 16.0 Mb and will
2009 Jul 10
0
Error when running the examples in plotMultiTS / QRMlib
Dear List, R ist somtimes a bit frustrating... I ran the example from http://bm2.genes.nig.ac.jp/RGM2/R_current/library/QRMlib/man/plotMultiTS.html and I get an error. Has someone an explanation for this? Thanks a lot, Steve CODE: library(R.utils) library(tseries) library(wmtsa) library(waveslim) library(brainwaver) library(timeSeries) library(QRMlib) > ?...
2009 Dec 16
0
R graphics
...r Distributions Econometrics Environmetrics ExperimentalDesign Finance Genetics gR Graphics HighPerformanceComputing MachineLearning MedicalImaging Multivariate NaturalLanguageProcessing Optimization Pharmacokinetics Psychometrics Robust SocialSciences Spatial Survival TimeSeries Other URL: http://bm2.genes.nig.ac.jp/RGM2/index.php?clear=all -- Share your knowledge on our R group at: http://www.analyticbridge.com/group/rprojectandotherfreesoftwaretools/forum/topics/r-graphics
2010 Mar 07
0
How the change the dimension of an individual cell [i.e. the cell corresponding to an observation in data matrix] in a heatmap.2?
...xlab="specification variables", ylab= "Car Models", main="heatmap(, ..., scale=\"column\")", tracecol="green", density="density") This gives me a heatmap similar to the 9th heatmap on this page. http://bm2.genes.nig.ac.jp/RGM2/R_current/library/gplots/man/heatmap.2.html Now, my question is - if I wanted to increase the dimension of each cell in this heatmap - say- from 1 inch x 2 inch to 3 inch x 4 inch ( it is OK if I can do this in terms of pixels). Is it possible to do this ? (It is equivalent to...
2009 Dec 06
3
estimate inverse gaussian in R
I have a one-variable data set in R. The plot of histogram of my numerical variable suggests an inverse gaussian distribution. How can I obtain best estimation for the two parameters of inverse gaussian based on my data? Thanks. -- View this message in context: http://n4.nabble.com/estimate-inverse-gaussian-in-R-tp949692p949692.html Sent from the R help mailing list archive at Nabble.com.
2011 Oct 01
1
Fitting 3 beta distributions
Hi, I want to fit 3 beta distributions to my data which ranges between 0 and 1. What are the functions that I can easily call and specify that 3 beta distributions should be fitted? I have already looked at normalmixEM and fitdistr but they dont seem to be applicable (normalmixEM is only for fitting normal dist and fitdistr will only fit 1 distribution, not 3). Is that right? Also, my data has 26
2011 Apr 29
2
Dovecot Folder Creation Problem
Hi all, I installed Dovecot-Postfix as an IMAP mail server and also RoundCube as webmail. When I create an account using Postfix Admin and login to webmail, roundCube creates the Junk Mail, Deleted Emails folder automatically. I also added this account to my Microsoft Outlook 2007. Following some tutorials on the internet I created an Outlook rule to move the sent emails to the IMAP
2008 Dec 07
2
concordance correlation coefficient using R
Hi. I have data which i would want to assess the degree of agreement between two assays, e.g., to evaluate reproducibility or for inter-rater reliability. I have used the Pearson product-moment correlation coefficient. It looks good ranginging between 0.90 to 0.998. Though this looks good. I am told the Concordance correlation coefficient will give a better picture of how reproducible the assay