search for: bgunter

It is in the doBy package. Thanks From: Bert Gunter [mailto:bgunter.4567 at gmail.com] Sent: Tuesday, February 13, 2018 4:32 PM To: Pius Mwansa <pmwansa at shaw.ca> Cc: R-help <r-help at r-project.org> Subject: Re: [R] LSmeans and lsmeans Always cc the list unless there is good reason to keep your reply private. There is no LSmeans() function in t...

...and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Tue, Feb 13, 2018 at 3:38 PM, Pius Mwansa <pmwansa at shaw.ca> wrote: > It is in the doBy package. > > > > Thanks > > > > *From:* Bert Gunter [mailto:bgunter.4567 at gmail.com] > *Sent:* Tuesday, February 13, 2018 4:32 PM > > *To:* Pius Mwansa <pmwansa at shaw.ca> > *Cc:* R-help <r-help at r-project.org> > *Subject:* Re: [R] LSmeans and lsmeans > > > > Always cc the list unless there is good reason to keep your rep...

...need to convert back: ?as.hexmode -- Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Sat, Apr 16, 2016 at 8:20 AM, Bert Gunter <bgunter.4567 at gmail.com> wrote: > ?strtoi > > You'll have to remove the "#" first, e.g. via substring() > > -- Bert > > > Bert Gunter > > "The trouble with having an open mind is that people keep coming along > and sticking things into it." >...

...255 blue 0 64 0 > rgb2hsv(col2rgb(myColors)) One Two Three h 0.08104575 0.3891798 0.1666667 s 1.00000000 1.0000000 1.0000000 v 1.00000000 0.7490196 1.0000000 Bill Dunlap TIBCO Software wdunlap tibco.com On Sat, Apr 16, 2016 at 8:27 AM, Bert Gunter <bgunter.4567 at gmail.com> wrote: > ... and if you need to convert back: ?as.hexmode > > > -- Bert > > > Bert Gunter > > "The trouble with having an open mind is that people keep coming along > and sticking things into it." > -- Opus (aka Berkeley Breathed in...

...sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Tue, Feb 13, 2018 at 3:20 PM, Pius Mwansa <pmwansa at shaw.ca> wrote: > They are in the lsmeans package. > > > > Pius > > > > *From:* Bert Gunter [mailto:bgunter.4567 at gmail.com] > *Sent:* Tuesday, February 13, 2018 4:16 PM > *To:* Pius Mwansa <pmwansa at shaw.ca> > *Cc:* R-help <r-help at r-project.org> > *Subject:* Re: [R] LSmeans and lsmeans > > > > In what packages? > > -- Bert > > > Bert Gunter >...

...an example. The values I have are 0 , 1, 2 . Tabulate () function seem to ignore calculating the frequency of 0 values and this is my exact problem as the frequency of 0 values should also be calculated for the maf to be calculated correctly. ________________________________ From: Bert Gunter <bgunter.4567 at gmail.com> Sent: 09 November 2017 23:51:35 To: Allaisone 1; R-help Subject: Re: [R] Calculating frequencies of multiple values in 200 colomns [[elided Hotmail spam]] "For example, if I have the values : 1 , 2 , 3 in each column, applying Tabulate () would calculate the frequency o...

...mail.com>?s solution was able to achieve that. Nonetheless, we do appreciate your solution. Regards ------------------ Kevin Wamae From: William Dunlap <wdunlap at tibco.com> Date: Saturday, 14 October 2017 at 20:21 To: Kevin Wamae <KWamae at kemri-wellcome.org> Cc: Bert Gunter <bgunter.4567 at gmail.com>, Rui Barradas <ruipbarradas at sapo.pt>, R-help <R-help at r-project.org> Subject: Re: [R] Populate one data frame with values from another dataframe for rows that match Your example used one distinct studyno in DF1 and one distinct pf_mcl in DF2. I think that ma...

...ght the rules somehow on the collection of trees and give > a probability. But if that doesnt make sense, then can you just tell me > how to get the decsion rules with one tree and I will work from that. > > Mike > > Mike > > On Wed, Apr 13, 2016 at 4:30 PM, Bert Gunter <bgunter.4567 at gmail.com> wrote: > >> I think you are missing the point of random forests. But if you just >> want to predict using the forest, there is a predict() method that you >> can use. Other than that, I certainly don't understand what you mean. >> Maybe someone e...

...thout 3 . I > need a way to calculate the frequencies of all of the 3 values so the > calculation of maf will be correct as it will consider all the 3 > frequencies but not only 2 . > > > Regards > > Allahisone > ------------------------------ > *From:* Bert Gunter <bgunter.4567 at gmail.com> > *Sent:* 09 November 2017 20:56:39 > *To:* Allaisone 1 > *Cc:* r-help at R-project.org > *Subject:* Re: [R] Calculating frequencies of multiple values in 200 > colomns > > This is not a good way to do things! R has many powerful built in > functions to...

...e values I have are 0 , 1, 2 . Tabulate () function seem to ignore calculating the frequency of 0 values and this is my exact problem as the frequency of 0 values should also be calculated for the maf to be calculated correctly. > > ________________________________ > From: Bert Gunter <bgunter.4567 at gmail.com> > Sent: 09 November 2017 23:51:35 > To: Allaisone 1; R-help > Subject: Re: [R] Calculating frequencies of multiple values in 200 colomns > > [[elided Hotmail spam]] > > "For example, if I have the values : 1 , 2 , 3 in each column, applying Tabulate...

...39;m getting another cup of coffee... -- Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Tue, Apr 19, 2016 at 10:30 AM, Bert Gunter <bgunter.4567 at gmail.com> wrote: > NO NO -- I am wrong! The paste() expression is of course evaluated. > It's just that a character string is returned of the form "something - > something". > > I apologize for the confusion. > > -- Bert > > > > > Bert...

...imum of the density estimate. Of course, there is still the possibility > of a multi-modal distribution and the nuances of which kernel is used, > etc., etc. > > Food for thought. > > Regards, > > Marc Schwartz > > > > On Apr 19, 2016, at 7:07 PM, Bert Gunter <bgunter.4567 at gmail.com> wrote: > > > > Well, instead of your functions try: > > > > Mode <- function(x) { > > tabx <- table(x) > > tabx[which.max(tabx)] > > } > > > > and use R's IQR function instead of yours. > > > >...

...Hope you enjoyed your coffee! I > ended up just using the transform argument in the ddply function. It > worked and it repeated, then I called a mode function in another call to > ddply that summarised. Kinda hacky but oh well! > > On Tue, Apr 19, 2016 at 12:31 PM, Bert Gunter <bgunter.4567 at gmail.com> > wrote: > >> ... and I'm getting another cup of coffee... >> >> -- Bert >> Bert Gunter >> >> "The trouble with having an open mind is that people keep coming along >> and sticking things into it." >> -- Opus...

...at clarification Bert! Hope you enjoyed your coffee! I ended up just using the transform argument in the ddply function. It worked and it repeated, then I called a mode function in another call to ddply that summarised. Kinda hacky but oh well! On Tue, Apr 19, 2016 at 12:31 PM, Bert Gunter <bgunter.4567 at gmail.com> wrote: > ... and I'm getting another cup of coffee... > > -- Bert > Bert Gunter > > "The trouble with having an open mind is that people keep coming along > and sticking things into it." > -- Opus (aka Berkeley Breathed in his "Bloom...

...ees and > give > > a probability. But if that doesnt make sense, then can you just tell me > > how to get the decsion rules with one tree and I will work from that. > > > > Mike > > > > Mike > > > > On Wed, Apr 13, 2016 at 4:30 PM, Bert Gunter <bgunter.4567 at gmail.com > <javascript:_e(%7B%7D,'cvml','bgunter.4567 at gmail.com');>> wrote: > > > >> I think you are missing the point of random forests. But if you just > >> want to predict using the forest, there is a predict() method that you >...

...;> ended up just using the transform argument in the ddply function. It worked >>> and it repeated, then I called a mode function in another call to ddply that >>> summarised. Kinda hacky but oh well! >>> >>> On Tue, Apr 19, 2016 at 12:31 PM, Bert Gunter <bgunter.4567 at gmail.com> >>> wrote: >>>> >>>> ... and I'm getting another cup of coffee... >>>> >>>> -- Bert >>>> Bert Gunter >>>> >>>> "The trouble with having an open mind is that people keep coming...

...ave are 0 , 1, 2 . Tabulate () function seem to ignore calculating the frequency of 0 values and this is my exact problem as the frequency of 0 values should also be calculated for the maf to be calculated correctly. >> >> ________________________________ >> From: Bert Gunter <bgunter.4567 at gmail.com> >> Sent: 09 November 2017 23:51:35 >> To: Allaisone 1; R-help >> Subject: Re: [R] Calculating frequencies of multiple values in 200 colomns >> >> [[elided Hotmail spam]] >> >> "For example, if I have the values : 1 , 2 , 3 in ea...

Dear @Bert Gunter<mailto:bgunter.4567 at gmail.com>, I tried merge and I faced many challenges. @Rui Barradas<mailto:ruipbarradas at sapo.pt> solution is working. From: Bert Gunter <bgunter.4567 at gmail.com> Date: Friday, 13 October 2017 at 22:44 To: Kevin Wamae <KWamae at kemri-wellcome.org> Cc: R-help <...

...ou Jeff for your links. I am aware of them. However, they do not point to an R package for GP for binary classification which produces prediction intervals. It seems that r-help is not as it was before. Wish you all the best. Roger and out. ________________________________ From: Bert Gunter <bgunter.4567 at gmail.com> Sent: 12 December 2017 00:01 To: Jeff Newmiller Cc: R-help; Damjan Krstajic; Berry, Charles Subject: Re: [R] Gaussian Process Classification R packages For the record: I **was** trying to be helpful. I simply didn't know whether "I struggled" meant that the OP...

...re is still the possibility >> of a multi-modal distribution and the nuances of which kernel is used, etc., >> etc. >> >> Food for thought. >> >> Regards, >> >> Marc Schwartz >> >> >> > On Apr 19, 2016, at 7:07 PM, Bert Gunter <bgunter.4567 at gmail.com> wrote: >> > >> > Well, instead of your functions try: >> > >> > Mode <- function(x) { >> > tabx <- table(x) >> > tabx[which.max(tabx)] >> > } >> > >> > and use R's IQR function i...