search for: berend

Hi Berend, I see you are one of the contributors to the rbecnhmark package. I am sorry that I am bothering you again. I have tried to run your code (slightly tweaked) involving the benchmark function, and I am getting the following error message. What am I doing wrong? Error in benchmark(d1 <- s1(...

Dear all, I'm trying to write tabular data to a text file, these data will be the input of a Fortran program. The format needs to be "(i7,2x,7(e15.7,2x))". I have not been able to find a clean way of producing this output with write.table. I searched for a "write.fortran" function similar to read.fortran() in package utils but I couldn't find any. Below is a small

...3.5.2 Fedora 28 (x86_64) pkg, BLAS+Lapack = OpenBLAS > > Success > ======= > > - (by MM) : R-devel, R 3.5.2 patched on FC28, *self compiled* gcc 8.2, > using R's BLAS/Lapack > - (by Ralf Stubner): R 3.5.2 from Debian Stable (gcc 6.2) + OpenBLAS > - (by Berend H.) : R 3.5.2 [from CRAN] on macOS 10.14.3 (BLAS/Lapack ??) R 3.5.2 from CRAN using R's BLAS/Lapack. Berend .... > It would be great if this could be solved... > > Martin > > > >> I have tried passing in the gradient and turning on the trace and it gives nearl...

...es an identical second line to ~/.ssh/known_hosts2. Somewhere a comparison isn't working. An strace indicates that the ssh client indeed reads ~/.ssh/known-hosts2. The entry looks like the system B ssh_host_dsa_key.pub, so I assume the server is sending its DSA key. -- Kind regards, Berend -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= Berend De Schouwer, +27-11-712-1435, UCS

Followup: I have checked my package nleqslv which uses dgemv only from Fortran, on Kubuntu 18.04 with the development version of R. No errors or problems. Berend > On 12 Sep 2019, at 08:57, Berend Hasselman <bhh at xs4all.nl> wrote: > > > I have tried what I proposed in a virtual Kubuntu 18.04 which uses gfortran 7.4. > I used the latest development version of R. > > It worked just as on macOS. > > Berend > > &...

Hello, Where is the problem in this programming. I want two way matrix, but it gives problem. The program is given below: Thanks in advance. Regards Fazli Raziq rep = 2 genes = 5 pred = c() iter   = array (dim = c(rep, pred)) pred = array(dim = c(1, genes)) m = c() l = 1 w = 1 for(m in 1:rep) { t = time c = cens tab = cbind(t, c) # Resampling Time and Censoring cc = sample(c, replace = TRUE)

...comment FortEntries array and use R_useDynamicSymbols(dll, TRUE) for a dynamic search of Fortran routines. Regards, Christophe --------------------------------------- Christophe Dutang LMM, UdM, Le Mans, France web: http://dutangc.free.fr <http://dutangc.free.fr/> > Le 9 mai 2017 ? 14:32, Berend Hasselman <bhh at xs4all.nl> a ?crit : > > >> On 9 May 2017, at 13:44, Christophe Dutang <dutangc at gmail.com> wrote: >> >> Dear list, >> >> I?m trying to register Fortran routines in randtoolbox (in srt/init.c file), see https://r-forge.r-projec...

Dear all, I have just downloaded a package 'prob' and also loaded it using library(prob). Whereas function 'tosscoin' works very well the other functions like 'gbinom' for graphing density functions does not work. I get the message: > gbinom(20,0.3) Error: could not find function "gbinom" How do I go about it? Thanks. Kizito.

...you tried using tools:::package_native_routine_registration_skeleton()? If you don't like its output, you can easily edit its results and still avoid most pitfalls. Cheers, Jari Oksanen ________________________________________ From: R-devel <r-devel-bounces at r-project.org> on behalf of Berend Hasselman <bhh at xs4all.nl> Sent: 10 May 2017 09:48 To: Christophe Dutang Cc: r-devel at r-project.org Subject: Re: [Rd] registering Fortran routines in R packages Christophe, > On 10 May 2017, at 08:08, Christophe Dutang <dutangc at gmail.com> wrote: > > Thanks for your ema...

...ch/r-source/blob/trunk/src/gnuwin32/system.c#L110-L140) So, they're clearly different implementations on Windows and Unix. Also, for the Unix implementation, the code differ based on preprocessing directive HAVE_AQUA, which could explain why Spencer observes a different behavior than Peter and Berend (all on macOS). Whenever the R_CheckUserInterrupt() function is called it in turn always calls R_ProcessEvents(). At the end, there is a code snippet - if (R_interrupts_pending) onintr(); - which is Windows specific and could be another important difference between Windows and Unix. This functi...

...g from text files. The file has the structure > below: > > Time Column1 Column2 > 01.01.2001-12:00:00 This line does not contain 3 elements; only one. You'll have to fix that line. Delete it, prepend it with a comment character of add enough columns. Berend > 01.01.2001-24:00:00 12 11 > 01.02.2001-12:00:00 13 10 > 01.02.2001-24:00:00 11 12 > 01.03.2001-12:00:00 15 11 > 01.03.2001-24:00:00 16 10 > ... > > I just use the simple script...

On Thu, Dec 14, 2017 at 1:58 PM, Berend Hasselman <bhh at xs4all.nl> wrote: > >> On 14 Dec 2017, at 19:36, lily li <chocold12 at gmail.com> wrote: >> >> Hi R users, >> >> I have a question about reading from text files. The file has the structure >> below: >> >> Time...

Hi R users, I have a question about reading from text files. The file has the structure below: Time Column1 Column2 01.01.2001-12:00:00 01.01.2001-24:00:00 12 11 01.02.2001-12:00:00 13 10 01.02.2001-24:00:00 11 12 01.03.2001-12:00:00 15 11 01.03.2001-24:00:00 16 10 ... I

I have a vaiable named NAM having value : 1,2,3,4,5,6,7,8,9. I want to make an indicator variable that will take value 1 if NAM=7 or NAM=8 or NAM=9. How can I do that? I usually do: Var001<- ifelse(NAM==7,1,0) for the simplest case. [[alternative HTML version deleted]]

Hi, While using R CMD check I get the following Latex error message which occurs when creating PDF version of manual: LaTex error: File `inconsolata.sty' not found I am using Windows 7 (64-bit) and R 3.0.1. I have MikTex 2.9. I see that the incosolata.sty is present under \doc\fonts folder. How can I eliminate this problem? Thanks, Ravi [[alternative HTML version deleted]]

...23.4:/var/local/samba/* /samba I get prompted for the root login for 192.168.123.4, and the rsync appears to work fine. I really want to use the anonymous rsync method so as to avoid having to type in the password manually, so that I can automate this with a cron script. Please help. Regards, Berend Tober

Hello, BODY { font-family:Arial, Helvetica, sans-serif;font-size:12px; } Does any one know if there are any functions/packages available in R for robust fitting of ARMA time series models (e.g., similar to the function arima.rob() in S-PLUS)? Many thanks and kind regards, Isabella Isabella R. Ghement, Ph.D. Ghement Statistical Consulting Company 301-7031 Blundell Road,

I have an ordered "set" of numbers, represented by a vector, say > X <- c(10:13, 17,18) > X [1] 10 11 12 13 17 18 then I have a "sub-set" of X, say > Y <- c(11,12,17,18) Is there a simple way in R to have a logical vector (parallel to X) indicating what elements of X are in Y, i.e., > Inclusion [1] FALSE TRUE TRUE FALSE TRUE TRUE I'm

Berend, I do not think this works with gfortran 7+. I am calling the BLAS subroutine dgemv from Fortran code in my package eha, and the check (with R-devel) gives: gmlfun.f:223:1: warning: type of ?dgemv? does not match original declaration [-Wlto-type-mismatch] & score, ione) ^ /hom...

...es in the docs and now I'm back where I started. How can I figure out what is wrong? I might add that I am not afraid of using a console (actually prefer it on linux servers) but I am new to CentOS so I tried to do everything by using the GUI - which in this case keeps failing... Regards, Berend Dekens