Displaying 20 results from an estimated 243 matches for "bbolker".
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bolker
2018 Jan 04
3
silent recycling in logical indexing
...c(FALSE,TRUE,FALSE)],x[seq_along(x) %% 3 == 2])
On the other hand, it takes 0.025 vs 0.003 seconds per iteration ...
fortunes::fortune("7ms")
On Thu, Jan 4, 2018 at 4:09 PM, Berry, Charles <ccberry at ucsd.edu> wrote:
>
>
>> On Jan 4, 2018, at 11:56 AM, Ben Bolker <bbolker at gmail.com> wrote:
>>
>>
>> Sorry if this has been covered here somewhere in the past, but ...
>>
>> Does anyone know why logical vectors are *silently* recycled, even
>> when they are incommensurate lengths, when doing logical indexing?
>
> It is co...
2016 Apr 30
1
r-bugzilla maintainer?
...and can't find anything (can't
see anything being diverted to a spam box/filter)
* if I click on password reminder again I get "You have requested a
password token too recently to request another. Please wait 10 minutes
then try again."
* if I try to create a new account with bbolker at gmail.com it says one
already exists ...
* I can't find any contact/maintainer info on the r-bugs page.
cheers
Ben Bolker
2023 Nov 29
1
Code editor for writing R code
Presumably there's nothing stopping you *writing* LaTeX in comments
-- do you want a code editor that will render and display the LaTeX as
you write? (Or am I misunderstanding something?)
Does anyone do classic literate programming *sensu* Knuth any more?
https://rpubs.com/bbolker/3153
https://cran.r-project.org/web/packages/noweb/vignettes/noweb.pdf
On 2023-11-29 10:57 a.m., Christofer Bogaso wrote:
> Hi,
>
> Currently I use VS-Code to write codes in R. While it is very good, it
> does not allow me to write Latex expressions in comments, which I am
> will...
2010 Oct 29
7
date calculation
Hi list,
Could someone explain to me why the following result is not a integer?
> difftime(strptime("24NOV2004", format="%d%b%Y"), strptime("13MAY2004",
>format="%d%b%Y"), units="days")
Time difference of 195.0417 days
I'm using R2.12.0 on WinXP.
Thanks!
...Tao
2018 Apr 08
2
suggested patch for messages
Does anyone have comments on the new wording here?
Suggested:
The Title field should be in title case. Current version is:
(xxx)
In title case this would be:
(Xxx)
Hoping R core will see this here and magically adopt it, otherwise
I'll try posting it to the r bugs site ...
===================================================================
--- src/library/tools/R/QC.R (revision
2018 Jan 04
3
silent recycling in logical indexing
Sorry if this has been covered here somewhere in the past, but ...
Does anyone know why logical vectors are *silently* recycled, even
when they are incommensurate lengths, when doing logical indexing? This
is as documented:
For ?[?-indexing only: ?i?, ?j?, ?...? can be logical
vectors, indicating elements/slices to select. Such vectors
are recycled if necessary to match
2023 Oct 31
1
weights vs. offset (negative binomial regression)
...er my first model is a completely wrong model
> and the use of offset variable?is valid in the case that
> response variable is? not proportional to offset variable such as my
> dataset.
>
> Sincerely,
>
>
> Joon-Taek
>
> 2023? 10? 29? (?) ?? 3:25, Ben Bolker <bbolker at gmail.com
> <mailto:bbolker at gmail.com>>?? ??:
>
> ? ?Using an offset of log(Effort) as in your second model is the more
> standard way to approach this problem; it corresponds to assuming that
> catch is strictly proportional to effort. Adding log(Effort...
2019 Feb 22
2
model.matrix.default() silently ignores bad contrasts.arg
...>> -------------------------------------------------
>> John Fox, Professor Emeritus
>> McMaster University
>> Hamilton, Ontario, Canada
>> Web: http::/socserv.mcmaster.ca/jfox
>>
>> > On Feb 20, 2019, at 7:14 PM, Ben Bolker <bbolker at gmail.com> wrote:
>> >
>> > An lme4 user pointed out <https://github.com/lme4/lme4/issues/491> that
>> > passing contrasts as a string or symbol to [g]lmer (which would work if
>> > we were using `contrasts<-` to set contrasts on a...
2019 Feb 23
1
model.matrix.default() silently ignores bad contrasts.arg
...and the reminder about
filling the omission there!
Prepared to go (into the sources) now.
Martin
>> -----Original Message----- From: Martin Maechler
>> [mailto:maechler at stat.math.ethz.ch] Sent: Friday,
>> February 22, 2019 11:50 AM To: Ben Bolker
>> <bbolker at gmail.com> Cc: Fox, John <jfox at mcmaster.ca>;
>> r-devel at r-project.org Subject: Re: [Rd]
>> model.matrix.default() silently ignores bad contrasts.arg
>>
>> >>>>> Ben Bolker >>>>> on Thu, 21 Feb 2019 08:18:51 -05...
2024 Jun 08
1
changes in R-devel and zero-extent objects in Rcpp
...to avoid doing that.
>
> That is, I think this is ultimately a bug in the affected packages, but
> Rcpp could do better in detecting and handling this for client packages
> (avoiding a segfault).
>
> Best,
> Kevin
>
>
> On Sat, Jun 8, 2024, 3:06?PM Ben Bolker <bbolker at gmail.com
> <mailto:bbolker at gmail.com>> wrote:
>
>
> ? ? A change to R-devel (SVN r86629 or
> https://github.com/r-devel/r-svn/commit/92c1d5de23c93576f55062e26d446feface07250 <https://github.com/r-devel/r-svn/commit/92c1d5de23c93576f55062e26d446feface072...
2011 Nov 28
1
plotting multiple lines on single graph ggplot2
Hello everyone
I have some data of the following type.
100 200 300 400 500
1.1 1.2 1.3 1.4 1.5
600 700 800 900 1000
1.5 1.7 1.9 2.0 2.4
With plot() and points functions I can plot these 4 lines of data. But
I dont know how to do it with qplot or ggplot functions. The scenario
is something like this: the hundreds should appear on x-axis and the
fractional values of y axis.
Thanks alot.
MEMON
2023 Dec 14
0
R-help Digest, Vol 250, Issue 13
...cible code.
>
[[alternative HTML version deleted]]
------------------------------
Message: 3
Date: Tue, 12 Dec 2023 21:19:12 +0000 (UTC)
From: varin sacha <varinsacha at yahoo.fr>
To: "r-help at r-project.org" <r-help at r-project.org>, Ben Bolker
<bbolker at gmail.com>
Subject: Re: [R] ggplot2: Get the regression line with 95% confidence
bands
Message-ID: <68588390.888662.1702415952477 at mail.yahoo.com>
Content-Type: text/plain; charset="utf-8"
Dear Ben,
Dear Daniel,
Dear Rui,
Dear Bert,
Here below my R code.
I really a...
2024 Dec 24
1
Extract estimate of error variance from glm() object
I think vcov() gives estimates of VCV for coefficients.
I want estimate of SD for residuals
On Tue, Dec 24, 2024 at 7:24?PM Ben Bolker <bbolker at gmail.com> wrote:
>
> vcov(). ?
>
>
> On Tue, Dec 24, 2024, 8:45 AM Christofer Bogaso <bogaso.christofer at gmail.com> wrote:
>>
>> Hi,
>>
>> I have below GLM fit
>>
>> clotting <- data.frame(
>> u = c(5,10,15,20,30,40,60,8...
2025 Jan 08
1
binomial()$linkinv no longer accepts integer values
On Wed, 8 Jan 2025 10:57:47 -0500
Ben Bolker <bbolker at gmail.com> wrote:
> I haven't done the archaeology to figure out when this broke/exactly
> what change in the R code base broke it: it happened within the last
> month or so
binomial() itself exhibits this property even in R-4.2.2 from more than
two years ago:
R -q -s -e ...
2012 Jan 16
0
Fwd: Trouble installing packages on R2.14.1
Begin forwarded message:
> From: Ken Hutchison <vicvoncastle@gmail.com>
> Date: January 15, 2012 8:54:49 PM EST
> To: Ben Bolker <bbolker@gmail.com>
> Subject: Re: [R] Trouble installing packages on R2.14.1
>
> Check browser proxy settings and run R.exe with the proper flags to use them from cmd.
> Hope that helps,
> Ken
>
>
> On Jan 15, 2012, at 8:44 PM, Ben Bolker <bbolker@gmail.com> wrote:...
2025 Jan 08
1
binomial()$linkinv no longer accepts integer values
Thanks, that makes sense.
I guess if it never worked for integers (or hasn't worked in a long
time, at least) then it doesn't need to be fixed/changed ...
cheers
Ben
On 2025-01-08 11:20 a.m., Ivan Krylov wrote:
> On Wed, 8 Jan 2025 10:57:47 -0500
> Ben Bolker <bbolker at gmail.com> wrote:
>
>> I haven't done the archaeology to figure out when this broke/exactly
>> what change in the R code base broke it: it happened within the last
>> month or so
>
> binomial() itself exhibits this property even in R-4.2.2 from more than
>...
2024 Jun 10
1
changes in R-devel and zero-extent objects in Rcpp
> Date: Sat, 8 Jun 2024 19:16:22 -0400
> From: Ben Bolker <bbolker at gmail.com>
>
> The ASAN errors occur *even if the zero-length object is not actually
> accessed*/is used in a perfectly correct manner, i.e. it's perfectly
> legal in base R to define `m <- numeric(0)` or `m <- matrix(nrow = 0,
> ncol = 0)...
2024 Jun 08
1
changes in R-devel and zero-extent objects in Rcpp
...making these out-of-bounds
accesses should be fixed to avoid doing that.
That is, I think this is ultimately a bug in the affected packages, but
Rcpp could do better in detecting and handling this for client packages
(avoiding a segfault).
Best,
Kevin
On Sat, Jun 8, 2024, 3:06?PM Ben Bolker <bbolker at gmail.com> wrote:
>
> A change to R-devel (SVN r86629 or
>
> https://github.com/r-devel/r-svn/commit/92c1d5de23c93576f55062e26d446feface07250
> has changed the handling of pointers to zero-length objects, leading to
> ASAN issues with a number of Rcpp-based packages (th...
2024 Jun 09
1
[External] Re: changes in R-devel and zero-extent objects in Rcpp
...That is, I think this is ultimately a bug in the affected packages, but
>> Rcpp could do better in detecting and handling this for client packages
>> (avoiding a segfault).
>>
>> Best,
>> Kevin
>>
>>
>> On Sat, Jun 8, 2024, 3:06?PM Ben Bolker <bbolker at gmail.com
>> <mailto:bbolker at gmail.com>> wrote:
>>
>>
>> ? ? A change to R-devel (SVN r86629 or
>> https://github.com/r-devel/r-svn/commit/92c1d5de23c93576f55062e26d446feface07250
>> <https://github.com/r-devel/r-svn/commit/92c1d5de2...
2024 Dec 24
1
Extract estimate of error variance from glm() object
?deviance ?anova
Bert
On Tue, Dec 24, 2024 at 6:22?AM Christofer Bogaso
<bogaso.christofer at gmail.com> wrote:
>
> I think vcov() gives estimates of VCV for coefficients.
>
> I want estimate of SD for residuals
>
> On Tue, Dec 24, 2024 at 7:24?PM Ben Bolker <bbolker at gmail.com> wrote:
> >
> > vcov(). ?
> >
> >
> > On Tue, Dec 24, 2024, 8:45 AM Christofer Bogaso <bogaso.christofer at gmail.com> wrote:
> >>
> >> Hi,
> >>
> >> I have below GLM fit
> >>
> >> clotting <...