search for: babyak

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2010 Jan 27
1
control of scat1d tick color in plot.Predict?
.... The ticks show up fine, but I'd like to alter the color. I know the ticks are produced by scat1d, but after spending a fair bit of time going through documentation, it still isn't clear to me how to do this in the context of lattice. Guidance would be greatly appreciated. Thanks, Mike Babyak Duke University Medical Center My code using R 2.10.1/windows XP myx<-c(1,2,3,4) myy<-c(1,2,3,5) library(rms) d<-datadist(myx) options(datadist="d") myfit<-ols(myy~myx,x=T,y=T) p1<-Predict(myfit,myx =.) library(lattice) #change line to black line <- trellis.par.g...
2009 Dec 07
1
multiple plots using summary in rms package
...I run the code below using something like plot(x~y) and plot(a~b) instead of the two rms summary objects, it works fine, so I am assuming there is something about rms I am missing. I'd be happy to provide some data if that would help. Any guidance would be greatly appreciated. Thanks, Mike Babyak Duke University Medical Center ######################################################## #summary of dietary variables broken out by Groups A, B, and C sumfc<-summary(Group~fcgrain+fcveg+fcfruit+fcmeat+fcdairy+fcnsl+ fcfat+fcsatfat+fcsweet+fcsod, method='reverse', overall=F, te...
2012 Apr 30
1
question on jitter in plot.Predict in rms
...e larger one? Of secondary importance, anything you can tell me about improving my clumsy little simulation code would be welcome--I have little to no idea what I'm doing there. for example, would there be a way to produce the group variable with the disparate Ns more directly? Thanks, Mike Babyak Behavioral Medicine Research Center Duke University Medical Center #question about jitter/llist in rms #R v 2.14.1 under windows 7 #################################################################### #question about jitter/llist in rms require(rms) #simulate some data n = 5000 age = runif...
2006 Aug 31
0
sample size for recurrent events
...some SAS code for power estimation, but I haven't had any luck contacting the authors. Does anyone have any experience with this issue or pointers to where I might do some reading on this topic? Of course, any thoughts on the approriate model would also be more than welcome. Thanks, Mike Babyak
2008 Mar 02
0
new to latex to pdf
...pdf. I'm sure I'm missing some fundamental concept here, but I'm afraid I'm not seeing it. I'd appreciate if anyone could point me in the right direction. ( I have no trouble writing my own simple latex code and converting it to pdf using pdftex in miktex). Thanks, Mike Babyak Department of Psychiatry and Behavioral Science Duke University Medical Center ************************** Here's the code: library(Hmisc) library(survival) getHdata(pbc) pbc<-upData(pbc, moveUnits=TRUE, labels=c(stage='Histologic Stage\nLudwig Criteria')) kmsurv <- function(S...
2009 Jul 18
5
Hmisc, Design, summary.Design plot- changing confidence intervals, adding color or decreasing font size
Hi, 1. I want 95% not 99% confidence intervals in my summary.Design plot using the Design package. Putting conf.int=.95 as an argument in plot does not work. The default appears to be .99 not .95 as stated in the package Design manual (p. 164). 2. My sweave chuck is below and my output is attached as well as linked here: http://www.sonoma.edu/users/s/stanny/330A/project/ciplot.pdf 3.