Displaying 1 result from an estimated 1 matches for "atgc".
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argc
2011 Jul 04
1
writeLines + foreach/doMC
...ines(paste(gettable1(uniq.Seq[i]),collapse=" "), fileConn) #write
the the results line
}
close(fileConn)
the code excute well, but the problem is that some lines are wired:
The header and lot of lines are ok :
ReadID Freq Seq LOC_UG Nb_UG_Seq
HWI-EA332_0036:5:16:9530:21025#ATGC/1 XXXXXXXXXXXXXXXXXXXX 2
XXXXX_10130:489:+,XXXXX_10130:489:+ 2
HWI-EA332_0036:5:117:6674:4940#ATGC/1 XXXXXXXXXXXXXXXXXXXX 1
XXXXX:432:-,XXXXX:432:- 2
HWI-EA332_0036:5:62:15592:7375#ATGC/1 XXXXXXXXXXXXXXXXXXXX 2
XXXXX_22660:253:+,XXXXX_22660:253:+ 2
HWI-EA332_0036:5:110:14349:8422#A...