Displaying 1 result from an estimated 1 matches for "assemviral_contigslen".
2010 Aug 05
2
colour of label points on a boxplot
...contig_length, read_count).
Each dataset is composed of 3 types of contigs (assemblies of genomic
fragments), 1- all Bacterial fragments, 2 - all Viral fragments, 3 -
mixed fragments.
I identified the type of contig through a merge with another table with
just contig_id and contig_type as below:
AssemViral_ContigsLen<-merge(Assem_ContigsLen,allViral_contigs,by.x="contig_id",by.y="X.Contid.ID",all.x=FALSE)
Below is a boxplot for
boxplot(Assem_ContigsLen7$length,Assem_ContigsLen8$length,Assem_ContigsLen9$length,Assem_ContigsLen10$length,Assem_ContigsLen11$length,Assem_ContigsLen12$length...