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2012 Jun 09
2
Help with permutation function from Turner et al. 2010 (Ecology)
...emp[z,])
res.p<-res.temp2[,-1] # Rows of residuals are now randomized
y.rand<-yhat+res.p
lm.new<-lm(y.rand~o*g,x=T,model=T)
ls<-data.frame(expand.grid(o=levels(o),g=levels(g)))
ls[]<-lapply(ls, factor)
means.r<-predict(lm.new,ls)
traj.r<-arrayspecs(means.r,g,o)
traj.size.r<-trajsize(traj.r)
traj.dir.r<-trajorient(traj.r,ang.cor=T)
traj.shape.r<-trajshape(traj.r)
result<-traj.result(traj.size.r,traj.dir.r,traj.shape.r)
p.table<-rbind(p.table,c(i,result))
}
p.table
}
But when I try to execute the funct...