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2011 Aug 22
1
select columns array2 not equal to 10
Dear R community,
I have a data set like the following:
probe_name chr_id position array1 array2 array3 array4 array5 array6
array7
1 C-3AAAA 10 16566949 10 10 10 10 10 10
10
2 C-3AAAB 17 33478940 10 10 10 10 10 10
10
3 C-3AAAC 3 187369224 10 10 2 10 10 1 10
4 C-3AAAD 8 28375041 10 10 10 10 10...
2011 Nov 16
4
Pairwise correlation
Dear All,
I am not familiar with R yet I want to use it to perform some task, hence my
posting here. I hope someone can help.
I have a set of data, genes (rows) and samples (columns). I want to do a
Pearson correlation on all the possible pairwise combinations of all the
genes (2000). Does anyone have an idea of how to execute this in R?
Thanks in advance.
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