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Hi! I am searching for the Cochran-Armitage-trend-test. Is it included in an R-package? Thank you! --

Dear sir, I am Shibu John from Thrombosis Research Institute India. It is a multidisciplinary organisation concerned with the interrelated problems of thrombosis and atherosclerosis. I was searching for Cochran armitage trend test program in R. Then I had seen your R coding for C-A trend test. I tried that in the R software. But I can?t run the program due the [Error: could not find function "independence_test"]. Where is the declaration of this function? I was trying the trend test for Genotype freque...

Dear R-enthusiasts, I am trying to do a Cochran-Armitage test for trend in R. After consulting google I found Torsten Hothorn's remark that the 'coin' library could be used. lungtumor <- data.frame(dose = rep(c(0, 1, 2), c(40, 50, 48)), tumor = c(rep(c(0, 1), c(38, 2)), rep(c(0, 1)...

...Product: ipset Version: unspecified Platform: All OS/Version: All Status: NEW Severity: normal Priority: P5 Component: default AssignedTo: netfilter-buglog at lists.netfilter.org ReportedBy: quentin at armitage.org.uk Estimated Hours: 0.0 Created attachment 409 --> https://bugzilla.netfilter.org/attachment.cgi?id=409 Patch to allow UDP service names to be specified for bitmap:port The following commands produce the error message below: # ipset create foo bitmap:port range 500-999 # ipset add fr...

...Product: ipset Version: unspecified Platform: All OS/Version: All Status: NEW Severity: normal Priority: P5 Component: default AssignedTo: netfilter-buglog at lists.netfilter.org ReportedBy: quentin at armitage.org.uk Estimated Hours: 0.0 I can add an iptables rule that references an ipset of the wrong address family, which doesn't seem sensible. For example: ipset create foo hash:ip family inet ip6tables -A foo_chain -m set --match-set foo -j LOG or ipset create foo6 hash:ip family inet6 ipta...

...ze = 2, rang =0.1, decay = 5e-4, maxit = 200) # weights: 19 initial value 73.864441 . . . final value 0.339114 converged Error in cv.factor(y, formula, data, model = model, predict = predict, : predict does not return factor values Thanks, Dave ______________________________________ Dave Armitage Wildlife Ecology and Conservation University of Florida

...Product: ipset Version: unspecified Hardware: x86_64 OS: All Status: NEW Severity: enhancement Priority: P5 Component: default Assignee: netfilter-buglog at lists.netfilter.org Reporter: quentin at armitage.org.uk The header files include/libipset/linux_ip_set*.h are copies of the kernel headers, which are be installed if kernel headers are installed. Since the two sets of headers define the same things, it is necessary that the include guards are the same so that including one stops the definitions...

...Product: iptables Version: unspecified Platform: All OS/Version: All Status: NEW Severity: minor Priority: P5 Component: libiptc AssignedTo: netfilter-buglog at lists.netfilter.org ReportedBy: quentin at armitage.org.uk Estimated Hours: 0.0 libiptc/libiptc.h specifies extern "C", and although libip6tc.h includes a test for __cplusplus at the beginning, it doesn't specify C linkage. -- Configure bugmail: https://bugzilla.netfilter.org/userprefs.cgi?tab=email ------- You are receiving thi...

This isn''t affecting my app, but I''d like to know the reason why I''m seeing this. In my layout, the following code <%= image_tag "front.jpg", :size =>"760x175" %> generates <img alt="Front" height="175" src="/images/front.jpg?1122106054" width="760" /> Where is the parameter in the

I partly answered my question since independence_test() function in coin package apparently do Cochran-Armitage trend test just like Eric Lecoutre's function tabletrend() - slightly modified here: > independence_test(pheno ~ geno, data = dat2, teststat = "quad", scores = list(geno = c(0, 1, 2))) Asymptotic General Independence Test data: pheno by groups 1 < 2 < 3 chi-squa...

...d Product: ipset Version: unspecified Platform: All OS/Version: All Status: NEW Severity: minor Priority: P5 Component: default AssignedTo: netfilter-buglog at lists.netfilter.org ReportedBy: quentin at armitage.org.uk Estimated Hours: 0.0 # ipset create foo hash:ip netmask 24 # ipset add foo 1.2.3.4/24 # ipset add foo 1.2.4.5/32 # ipset list foo Name: foo Type: hash:ip Revision: 0 Header: family inet hashsize 1024 maxelem 65536 netmask 24 Size in memory: 16536 References: 0 Members: 1.2.4.0 1.2.3.0...

...Product: iptables Version: 1.4.x Hardware: x86_64 OS: All Status: NEW Severity: enhancement Priority: P5 Component: iptables Assignee: netfilter-buglog at lists.netfilter.org Reporter: quentin at armitage.org.uk Including <libiptc/libiptc.h> causes a compilation failure with multiple messages like: In file included from /usr/include/linux/netfilter_ipv4/ip_tables.h:20:0, from /usr/include/libiptc/libiptc.h:12, from /tmp/inc.c:1: /usr/include/linux/if.h:71:2:...

In my webapp a todolist has many todo items. I am trying to display lists that are completed. By incomplete I mean that all the items in that list are done (booolean = true). I hope to have a list of active lists and complete lists on one page. I''m no ruby expert by any means so I think I have to ''pipe'' some results into another query?? Can you help please? -- Posted

...ED Product: iptables Version: 1.4.x Platform: All OS/Version: All Status: NEW Severity: normal Priority: P5 Component: iptables AssignedTo: netfilter-buglog at lists.netfilter.org ReportedBy: quentin at armitage.org.uk Estimated Hours: 0.0 Created attachment 428 --> https://bugzilla.netfilter.org/attachment.cgi?id=428 Patch for iptables to allow NONE to work with other statuses If --ctstatus SEEN_REPLY,EXPECTED is specified, it matches on either SEEN_REPLY or EXPECTED. On the other hand, if --ct...

Hi there, Is a web app always preferable to a ''real'' app? - or are there times when a real app should be used? I''m starting a new app and can''t decide which would be best. Is Ruby (not RoR) suitable for a real app? Chris. -- Posted via http://www.ruby-forum.com/.

...Product: ipset Version: unspecified Platform: x86_64 OS/Version: All Status: NEW Severity: critical Priority: P5 Component: default AssignedTo: netfilter-buglog at lists.netfilter.org ReportedBy: quentin at armitage.org.uk Estimated Hours: 0.0 Using ipset version 6.19 on kernel version 3.6.11, a bitmap:ip range 1-65535 is reported to be using 8304 bytes of memory. With a kernel version 3.11.3, the same size bitmap:ip is reported to be using 524424 bytes of memory. # uname -r 3.6.11-4.fc16.x86_64 # ipset...

...Product: ipset Version: unspecified Platform: All OS/Version: All Status: NEW Severity: normal Priority: P5 Component: default AssignedTo: netfilter-buglog at lists.netfilter.org ReportedBy: quentin at armitage.org.uk Estimated Hours: 0.0 The following fails as expected: # ipset create foo hash:ip family ipv6 netmask 1 ipset v6.19: Syntax error: '1' is out of range 4-124 However, the following does not fail: # ipset create foo hash:ip netmask 1 family ipv6 # ipset add foo ffff:: # ipset list...

To the R-help list, In the documentation of the prop.trend.test function in the stats package, no bibliography has been provided which would allow one to find out the theoretical basis of that function and/or details of its implementation. May I suggest that some bibliography be included, as it generally happens with other statistical functions. I currently use R 2.8.0 running on Windows XP.

Hello, I am trying to simulate 10 relicates of 100-tables. Each table is a 2 x 3 and 80% pf the tables are true nulls and 20% are non-nulls. The nulls follow the Hardy Weinberg distribution (ratio) 1:2:1. I have the code below but the p-values are not what I am expecting. I want to use the Cochran Armitage trend test to get the p-values. num.reps=10 num.vars=1000 pi0 = 80 num.subjects = 100 #Create list control list.control and list.treatment #Minor alleles will be from (0.10, 0.30) #num.subjects is the number of subjects in each datamat = matrix(0,num.vars,3) list.treat <- vector("list&...

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